Difference between revisions of "YumC"

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|colspan="2" | '''Genetic context''' <br/> [[Image:yumC_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:yumC_context.gif]]
 
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|colspan="2" |'''[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yumC_3301586_3302584_1 Expression at a glance]'''&#160;&#160;&#160;{{PubMed|22383849}}<br/>[[Image:yumC_expression.png|500px]]
 
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Revision as of 09:29, 23 April 2012

  • Description: ferredoxin-NAD(P)+ oxidoreductase

Gene name yumC
Synonyms
Essential yes PubMed
Product ferredoxin-NAD(P)+ oxidoreductase
Function redox reactions that involve ferredoxin
MW, pI 36 kDa, 5.573
Gene length, protein length 996 bp, 332 aa
Immediate neighbours yumB, yuzG
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YumC context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YumC expression.png
























Categories containing this gene/protein

electron transport/ other, essential genes

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU32110

Phenotypes of a mutant

essential PubMed

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: 2 reduced ferredoxin + NADP+ + H+ = 2 oxidized ferredoxin + NADPH (according to Swiss-Prot)
  • Protein family: ferredoxin--NADP reductase type 2 family (according to Swiss-Prot)
  • Paralogous protein(s): YcgT

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s): FAD, NADPH PubMed
  • Effectors of protein activity:
  • Interactions: dimeric protein PubMed
  • Localization:

Database entries

  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References