Difference between revisions of "YukD"
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|colspan="2" | '''Genetic context''' <br/> [[Image:yukD_context.gif]] | |colspan="2" | '''Genetic context''' <br/> [[Image:yukD_context.gif]] | ||
<div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div> | <div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div> | ||
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| + | |colspan="2" |'''[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yukD_3275832_3276071_-1 Expression at a glance]'''   {{PubMed|22383849}}<br/>[[Image:yukD_expression.png|500px]] | ||
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Revision as of 08:24, 23 April 2012
- Description: putative bacteriocin
| Gene name | yukD |
| Synonyms | |
| Essential | no |
| Product | putative bacteriocin |
| Function | unknown |
| MW, pI | 8 kDa, 6.311 |
| Gene length, protein length | 237 bp, 79 aa |
| Immediate neighbours | yukC, yukE |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
biosynthesis of antibacterial compounds
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU31900
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization:
Database entries
- Structure: 2BPS
- UniProt: P71071
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Sigma factor:
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Anne de Jong, Sacha A F T van Hijum, Jetta J E Bijlsma, Jan Kok, Oscar P Kuipers
BAGEL: a web-based bacteriocin genome mining tool.
Nucleic Acids Res: 2006, 34(Web Server issue);W273-9
[PubMed:16845009]
[WorldCat.org]
[DOI]
(I p)
Carlos São-José, Catarina Baptista, Mário A Santos
Bacillus subtilis operon encoding a membrane receptor for bacteriophage SPP1.
J Bacteriol: 2004, 186(24);8337-46
[PubMed:15576783]
[WorldCat.org]
[DOI]
(P p)
