Difference between revisions of "YesW"

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|colspan="2" | '''Genetic context''' <br/> [[Image:yesW_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:yesW_context.gif]]
 
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|colspan="2" |'''[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yesW_770234_772096_1 Expression at a glance]'''&#160;&#160;&#160;{{PubMed|22383849}}<br/>[[Image:yesW_expression.png|500px]]
 
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Revision as of 15:41, 18 April 2012

  • Description: rhamnogalacturonan lyase, generates oligosaccharides

Gene name yesW
Synonyms
Essential no
Product rhamnogalacturonan lyase, generates oligosaccharides
Function utilization of rhamnogalacturonan
MW, pI 67 kDa, 5.966
Gene length, protein length 1860 bp, 620 aa
Immediate neighbours yesV, yesX
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YesW context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YesW expression.png
























Categories containing this gene/protein

utilization of specific carbon sources

This gene is a member of the following regulons

YesS regulon

The gene

Basic information

  • Locus tag: BSU07050

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: FG-GAP repeat (according to Swiss-Prot)
  • Paralogous protein(s): YesX

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Sigma factor:
  • Regulatory mechanism: YesS: transcriptional activation PubMed
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References