Difference between revisions of "Ald"

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* '''Description:''' L-alanine dehydrogenase <br/><br/>
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NDH8wq  <a href="http://irfsjefqmfjq.com/">irfsjefqmfjq</a>, [url=http://jgenqmspgcar.com/]jgenqmspgcar[/url], [link=http://anrcnpxqlycn.com/]anrcnpxqlycn[/link], http://ijiqzxcextso.com/
 
 
{| align="right" border="1" cellpadding="2"
 
|-
 
|style="background:#ABCDEF;" align="center"|'''Gene name'''
 
|''ald''
 
|-
 
|style="background:#ABCDEF;" align="center"| '''Synonyms''' || ''spoVN ''
 
|-
 
|style="background:#ABCDEF;" align="center"| '''Essential''' || no
 
|-
 
|style="background:#ABCDEF;" align="center"| '''Product''' || L-alanine dehydrogenase
 
|-
 
|style="background:#ABCDEF;" align="center"|'''Function''' || alanine utilization
 
|-
 
|colspan="2" style="background:#FAF8CC;" align="center"| '''Metabolic function and regulation of this protein in [[SubtiPathways|''Subti''Pathways]]: <br/>[http://subtiwiki.uni-goettingen.de/pathways/ala_gly_ser.html Ala, Gly, Ser]'''
 
|-
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 39 kDa, 5.125 
 
|-
 
|style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 1134 bp, 378 aa
 
|-
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yukF]]'', ''[[yukJ]]''
 
|-
 
|colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+&#91;EMBLCDS:CAB15181&#93;+-newId sequences] <br/> (Barbe ''et al.'', 2009)'''
 
|-
 
|colspan="2" | '''Genetic context''' <br/> [[Image:ald_context.gif]]
 
<div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div>
 
|-
 
|}
 
 
 
__TOC__
 
 
 
<br/><br/><br/><br/><br/><br/>
 
 
 
= [[Categories]] containing this gene/protein =
 
{{SubtiWiki category|[[utilization of amino acids]]}}
 
 
 
= This gene is a member of the following [[regulons]] =
 
 
 
 
 
=The gene=
 
 
 
=== Basic information ===
 
 
 
* '''Locus tag:''' BSU31930
 
 
 
===Phenotypes of a mutant ===
 
 
 
=== Database entries ===
 
 
 
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/ald.html]
 
 
 
* '''SubtiList entry:''' [http://genolist.pasteur.fr/SubtiList/genome.cgi?gene_detail+BG10468]
 
 
 
=== Additional information===
 
 
 
 
 
 
 
 
 
=The protein=
 
 
 
=== Basic information/ Evolution ===
 
 
 
* '''Catalyzed reaction/ biological activity:''' L-alanine + H<sub>2</sub>O + NAD<sup>+</sup> = pyruvate + NH<sub>3</sub> + NADH (according to Swiss-Prot)
 
 
 
* '''Protein family:''' AlaDH/PNT family (according to Swiss-Prot)
 
 
 
* '''Paralogous protein(s):'''
 
 
 
=== Extended information on the protein ===
 
 
 
* '''Kinetic information:'''
 
 
 
* '''Domains:'''
 
 
 
* '''Modification:'''
 
 
 
* '''Cofactor(s):'''
 
 
 
* '''Effectors of protein activity:'''
 
 
 
* '''[[SubtInteract|Interactions]]:'''
 
 
 
* '''[[Localization]]:''' cytoplasm (according to Swiss-Prot)
 
 
 
=== Database entries ===
 
 
 
* '''Structure:''' [http://www.rcsb.org/pdb/cgi/explore.cgi?pdbId=2EEZ 2EEZ] (from ''Thermus thermophilus hb8 mutant'', 55% identity, 66% similarity)
 
 
 
 
 
* '''UniProt:''' [http://www.uniprot.org/uniprot/Q08352 Q08352]
 
 
 
* '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu:BSU31930]
 
 
 
* '''E.C. number:''' [http://www.expasy.org/enzyme/1.4.1.1 1.4.1.1]
 
 
 
=== Additional information===
 
 
 
=Expression and regulation=
 
 
 
* '''Operon:''' ''[[ald]]'' {{PubMed|8226620}}
 
 
 
* '''[[Sigma factor]]:''' [[SigA]] {{PubMed|8226620}}
 
 
 
* '''Regulation:'''
 
** induced by alanine {{PubMed|8226620}}
 
 
 
* '''Regulatory mechanism:'''
 
 
 
* '''Additional information:'''
 
 
 
=Biological materials =
 
 
 
* '''Mutant:'''
 
 
 
* '''Expression vector:'''
 
       
 
* '''lacZ fusion:'''
 
 
 
* '''GFP fusion:'''
 
 
 
* '''two-hybrid system:'''
 
 
 
* '''Antibody:'''
 
 
 
=Labs working on this gene/protein=
 
 
 
=Your additional remarks=
 
 
 
=References=
 
 
 
<pubmed>19114526,9168598,17183219,8226620,, </pubmed>
 
 
 
[[Category:Protein-coding genes]]
 

Revision as of 11:35, 16 April 2012

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