Difference between revisions of "YdhE"

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m (Reverted edits by 134.76.70.252 (talk) to last revision by Lflorez)
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* '''Operon:''''' [[ydhE]]'' {{PubMed|20639339}}
 
* '''Operon:''''' [[ydhE]]'' {{PubMed|20639339}}
  
* '''[[Sigma factor]]:'''  
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* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=ydhE_618095_619282_1 ydhE] {{PubMed|22383849}}
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* '''Sigma factor:'''  
  
 
* '''Regulation:'''  
 
* '''Regulation:'''  
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** [[LiaR]]: weak transcription activation {{PubMed|20639339}}
 
** [[LiaR]]: weak transcription activation {{PubMed|20639339}}
  
* '''Additional information:'''  
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* '''Additional information:'''
  
 
=Biological materials =
 
=Biological materials =

Revision as of 15:10, 12 April 2012

  • Description: similar to macrolide glycosyltransferase

Gene name ydhE
Synonyms
Essential no
Product unknown
Function unknown
MW, pI 42 kDa, 5.093
Gene length, protein length 1143 bp, 381 aa
Immediate neighbours ydhD, ydhF
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YdhE context.gif
This image was kindly provided by SubtiList



Categories containing this gene/protein

resistance against toxins/ antibiotics

This gene is a member of the following regulons

LiaR regulon

The gene

Basic information

  • Locus tag: BSU05720

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: UDP-glycosyltransferase family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Diana Wolf, Falk Kalamorz, Tina Wecke, Anna Juszczak, Ulrike Mäder, Georg Homuth, Sina Jordan, Janine Kirstein, Michael Hoppert, Birgit Voigt, Michael Hecker, Thorsten Mascher
In-depth profiling of the LiaR response of Bacillus subtilis.
J Bacteriol: 2010, 192(18);4680-93
[PubMed:20639339] [WorldCat.org] [DOI] (I p)