Difference between revisions of "CmpA"
 (Created page with "* '''Description:''' spore coat protein <br/><br/>  {| align="right" border="1" cellpadding="2"  |- |style="background:#ABCDEF;" align="center"|'''Gene name''' |''cmpA'' |- |styl...")  | 
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| Line 36: | Line 36: | ||
= This gene is a member of the following [[regulons]] =  | = This gene is a member of the following [[regulons]] =  | ||
{{SubtiWiki regulon|[[SigE regulon]]}},  | {{SubtiWiki regulon|[[SigE regulon]]}},  | ||
| − | {{SubtiWiki regulon|[[  | + | {{SubtiWiki regulon|[[SpoIIID regulon]]}}  | 
=The gene=  | =The gene=  | ||
| Line 42: | Line 42: | ||
=== Basic information ===  | === Basic information ===  | ||
| − | * '''Locus tag:'''   | + | * '''Locus tag:''' not available  | 
===Phenotypes of a mutant ===  | ===Phenotypes of a mutant ===  | ||
| Line 48: | Line 48: | ||
=== Database entries ===  | === Database entries ===  | ||
| − | * '''DBTBS entry:'''   | + | * '''DBTBS entry:''' no entry  | 
| − | * '''SubtiList entry:'''   | + | * '''SubtiList entry:''' no entry  | 
=== Additional information===  | === Additional information===  | ||
| Line 59: | Line 59: | ||
=== Basic information/ Evolution ===  | === Basic information/ Evolution ===  | ||
| − | * '''Catalyzed reaction/ biological activity:'''   | + | * '''Catalyzed reaction/ biological activity:'''    | 
| − | * '''Protein family:'''   | + | * '''Protein family:'''    | 
* '''Paralogous protein(s):'''  | * '''Paralogous protein(s):'''  | ||
| Line 78: | Line 78: | ||
* '''[[SubtInteract|Interactions]]:'''  | * '''[[SubtInteract|Interactions]]:'''  | ||
| − | |||
| − | |||
| − | |||
* '''[[Localization]]:'''    | * '''[[Localization]]:'''    | ||
| − | **   | + | ** surface of the developing spore  {{PubMed|22463703}}  | 
| + | |||
=== Database entries ===  | === Database entries ===  | ||
* '''Structure:'''	  | * '''Structure:'''	  | ||
| − | * '''UniProt:'''   | + | * '''UniProt:'''    | 
| − | * '''KEGG entry:'''   | + | * '''KEGG entry:'''    | 
* '''E.C. number:'''  | * '''E.C. number:'''  | ||
| Line 98: | Line 96: | ||
=Expression and regulation=  | =Expression and regulation=  | ||
| − | * '''Operon:''' ''[[  | + | * '''Operon:''' ''[[cmpA]]'' {{PubMed|22463703}}  | 
| − | * '''[[Sigma factor]]:''' [[SigE]] {{PubMed|  | + | * '''[[Sigma factor]]:''' [[SigE]] {{PubMed|22463703}}  | 
* '''Regulation:'''    | * '''Regulation:'''    | ||
| − | + | ** expressed early during sporulation in the mother cell ([[SigE]]) {{PubMed|22463703}}  | |
| − | ** expressed during sporulation in the mother cell ([[SigE  | ||
* '''Regulatory mechanism:'''    | * '''Regulatory mechanism:'''    | ||
| + | ** [[SpoIIID]]: transcription activation {{PubMed|22463703}}  | ||
* '''Additional information:'''  | * '''Additional information:'''  | ||
Revision as of 16:39, 11 April 2012
-  Description: spore coat protein 
 
| Gene name | cmpA | 
| Synonyms | |
| Essential | no | 
| Product | cortex morphogenetic protein A | 
| Function | |
| MW, pI | |
| Gene length, protein length | 111 bp, 37 aa | 
| Immediate neighbours | ydcI, ydcK | 
| Get the DNA and protein sequences  (Ebmeier et al., 2012)  | |
|  Genetic context  | |
Contents
Categories containing this gene/protein
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: not available
 
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
 
- SubtiList entry: no entry
 
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
 
- Protein family:
 
- Paralogous protein(s):
 
Extended information on the protein
- Kinetic information:
 
- Domains:
 
- Modification:
 
- Cofactor(s):
 
- Effectors of protein activity:
 
-  Localization: 
- surface of the developing spore PubMed
 
 
Database entries
- Structure:
 
- UniProt:
 
- KEGG entry:
 
- E.C. number:
 
Additional information
Expression and regulation
- Additional information:
 
Biological materials
- Mutant:
 
- Expression vector:
 
- lacZ fusion:
 
- GFP fusion:
 
- two-hybrid system:
 
- Antibody:
 
Labs working on this gene/protein
Arthur Aronson, Purdue University, West Lafayette, USA homepage
Adriano Henriques, Lisbon, Portugal homepage
Your additional remarks
References
Additional publications: PubMed
Rachele Isticato, Assunta Pelosi, Maurilio De Felice, Ezio Ricca  
CotE binds to CotC and CotU and mediates their interaction during spore coat formation in Bacillus subtilis. 
J Bacteriol: 2010, 192(4);949-54 
[PubMed:20023017]
  [WorldCat.org]
 [DOI]
 (I p)
Daniela Krajcíková, Magda Lukácová, Denisa Müllerová, Simon M Cutting, Imrich Barák  
Searching for protein-protein interactions within the Bacillus subtilis spore coat. 
J Bacteriol: 2009, 191(10);3212-9 
[PubMed:19304857]
  [WorldCat.org]
 [DOI]
 (I p)
Rachele Isticato, Assunta Pelosi, Rita Zilhão, Loredana Baccigalupi, Adriano O Henriques, Maurilio De Felice, Ezio Ricca  
CotC-CotU heterodimerization during assembly of the Bacillus subtilis spore coat. 
J Bacteriol: 2008, 190(4);1267-75 
[PubMed:18065538]
  [WorldCat.org]
 [DOI]
 (I p)
Caitlin C Ferguson, Amy H Camp, Richard Losick  
gerT, a newly discovered germination gene under the control of the sporulation transcription factor sigmaK in Bacillus subtilis. 
J Bacteriol: 2007, 189(21);7681-9 
[PubMed:17720779]
  [WorldCat.org]
 [DOI]
 (P p)
Teresa Costa, Mónica Serrano, Leif Steil, Uwe Völker, Charles P Moran, Adriano O Henriques  
The timing of cotE expression affects Bacillus subtilis spore coat morphology but not lysozyme resistance. 
J Bacteriol: 2007, 189(6);2401-10 
[PubMed:17172339]
  [WorldCat.org]
 [DOI]
 (P p)
Leif Steil, Mónica Serrano, Adriano O Henriques, Uwe Völker  
Genome-wide analysis of temporally regulated and compartment-specific gene expression in sporulating cells of Bacillus subtilis. 
Microbiology (Reading): 2005, 151(Pt 2);399-420 
[PubMed:15699190]
  [WorldCat.org]
 [DOI]
 (P p)
Katerina Ragkousi, Patrick Eichenberger, Christiaan van Ooij, Peter Setlow  
Identification of a new gene essential for germination of Bacillus subtilis spores with Ca2+-dipicolinate. 
J Bacteriol: 2003, 185(7);2315-29 
[PubMed:12644503]
  [WorldCat.org]
 [DOI]
 (P p)
Ulrike Mäder, Georg Homuth, Christian Scharf, Knut Büttner, Rüdiger Bode, Michael Hecker  
Transcriptome and proteome analysis of Bacillus subtilis gene expression modulated by amino acid availability. 
J Bacteriol: 2002, 184(15);4288-95 
[PubMed:12107147]
  [WorldCat.org]
 [DOI]
 (P p)
S Little, A Driks  
Functional analysis of the Bacillus subtilis morphogenetic spore coat protein CotE. 
Mol Microbiol: 2001, 42(4);1107-20 
[PubMed:11737650]
  [WorldCat.org]
 [DOI]
 (P p)
T Bauer, S Little, A G Stöver, A Driks  
Functional regions of the Bacillus subtilis spore coat morphogenetic protein CotE. 
J Bacteriol: 1999, 181(22);7043-51 
[PubMed:10559171]
  [WorldCat.org]
 [DOI]
 (P p)
F Ginetti, M Perego, A M Albertini, A Galizzi  
Bacillus subtilis mutS mutL operon: identification, nucleotide sequence and mutagenesis. 
Microbiology (Reading): 1996, 142 ( Pt 8);2021-9 
[PubMed:8760914]
  [WorldCat.org]
 [DOI]
 (P p)
K Pogliano, E Harry, R Losick  
Visualization of the subcellular location of sporulation proteins in Bacillus subtilis using immunofluorescence microscopy. 
Mol Microbiol: 1995, 18(3);459-70 
[PubMed:8748030]
  [WorldCat.org]
 [DOI]
 (P p)
C D Webb, A Decatur, A Teleman, R Losick  
Use of green fluorescent protein for visualization of cell-specific gene expression and subcellular protein localization during sporulation in Bacillus subtilis. 
J Bacteriol: 1995, 177(20);5906-11 
[PubMed:7592342]
  [WorldCat.org]
 [DOI]
 (P p)
A Driks, S Roels, B Beall, C P Moran, R Losick  
Subcellular localization of proteins involved in the assembly of the spore coat of Bacillus subtilis. 
Genes Dev: 1994, 8(2);234-44 
[PubMed:8299942]
  [WorldCat.org]
 [DOI]
 (P p)
L B Zheng, R Losick  
Cascade regulation of spore coat gene expression in Bacillus subtilis. 
J Mol Biol: 1990, 212(4);645-60 
[PubMed:1691789]
  [WorldCat.org]
 [DOI]
 (P p)
L B Zheng, W P Donovan, P C Fitz-James, R Losick  
Gene encoding a morphogenic protein required in the assembly of the outer coat of the Bacillus subtilis endospore. 
Genes Dev: 1988, 2(8);1047-54 
[PubMed:3139490]
  [WorldCat.org]
 [DOI]
 (P p)