Difference between revisions of "YaaK"
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=== Additional information=== | === Additional information=== | ||
| − | + | * The ''E.coli'' homolog: [http://ecoliwiki.net/colipedia/index.php/ybaB ''ybaB''] | |
=The protein= | =The protein= | ||
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=References= | =References= | ||
| − | <pubmed>12884008,, </pubmed> | + | <pubmed>12884008,19594923, </pubmed> |
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] | ||
Revision as of 17:20, 28 February 2011
- Description: unknown
| Gene name | yaaK |
| Synonyms | |
| Essential | no |
| Product | unknown |
| Function | unknown |
| MW, pI | 11 kDa, 4.536 |
| Gene length, protein length | 321 bp, 107 aa |
| Immediate neighbours | dnaX, recR |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
| |
Contents
Categories containing this gene/protein
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU00200
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
- The E.coli homolog: ybaB
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: UPF0133 family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization:
Database entries
- Structure:
- UniProt: P24281
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Operon:
- Regulation:
- Regulatory mechanism:
- Additional information: the mRNA is very stable (half-life > 15 min) PubMed
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Anne E Cooley, Sean P Riley, Keith Kral, M Clarke Miller, Edward DeMoll, Michael G Fried, Brian Stevenson
DNA-binding by Haemophilus influenzae and Escherichia coli YbaB, members of a widely-distributed bacterial protein family.
BMC Microbiol: 2009, 9;137
[PubMed:19594923]
[WorldCat.org]
[DOI]
(I e)
G Hambraeus, C von Wachenfeldt, L Hederstedt
Genome-wide survey of mRNA half-lives in Bacillus subtilis identifies extremely stable mRNAs.
Mol Genet Genomics: 2003, 269(5);706-14
[PubMed:12884008]
[WorldCat.org]
[DOI]
(P p)
