Difference between revisions of "GlcT"
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=Biological materials = | =Biological materials = | ||
− | * '''Mutant:''' GP109 (in frame deletion) | + | * '''Mutant:''' available in [[Stülke]] lab: |
+ | ** GP109 (in frame deletion) | ||
+ | ** GP778 (replacement of ''glcT'' and the ''ptsGHI'' operon by a spc cassette) | ||
+ | ** GP926 (substitution of ''glct'' and ''ptsG'' by a tet cassette) | ||
* '''Expression vector:''' | * '''Expression vector:''' |
Revision as of 13:08, 13 September 2010
- Description: Transcriptional antiterminator , controls expression of the ptsG-ptsH-ptsI operon
Gene name | glcT |
Synonyms | ykwA |
Essential | no |
Product | transcriptional antiterminator of the ptsG-ptsH-ptsI operon |
Function | control of glucose uptake |
Metabolic function and regulation of this protein in SubtiPathways: Central C-metabolism | |
MW, pI | 33,0 kDa, 7.01 |
Gene length, protein length | 855 bp, 285 amino acids |
Immediate neighbours | ykvZ, ptsG |
Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context This image was kindly provided by SubtiList
|
Contents
The gene
Basic information
- Locus tag: BSU13880
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: transcription antiterminator , RNA-binding protein, binds the ptsG RAT sequence
- Protein family: transcription antiterminator of the BglG/ SacY family
Extended information on the protein
- Kinetic information:
- Domains:
- RNA-binding domain (N-terminal, constitutive antiterminator)
- 2x PTS regulation domains (PRDs) (C-terminal, neg. regulated by PtsG)
- Modification: phosphorylation (His104)
- Cofactor(s):
- Effectors of protein activity:
- Localization:
Database entries
- UniProt: O31691
- KEGG entry: [2]
Additional information
Expression and regulation
- Operon:
- Sigma factor:
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant: available in Stülke lab:
- GP109 (in frame deletion)
- GP778 (replacement of glcT and the ptsGHI operon by a spc cassette)
- GP926 (substitution of glct and ptsG by a tet cassette)
- Expression vector:
- pGP124 (full length, in pWH844), available in Stülke lab
- pGP114 (amino acids 1-60, RNA-binding domain, in pWH844), available in Stülke lab
- pGP230 (amino acids 1-60, RNA-binding domain with thrombin cleavage site, in pWH844), available in Stülke lab
- pGP164 (both PRDs, in pWH844), in addition diverse expression vectors for phosphorylation site mutants and for RBD mutants (all in pWH844), available in Stülke lab
- pGP424 (PRDI, in pWH844), available in Stülke lab
- pGP425 (PRDII, in pWH844), available in Stülke lab
- pGP442 (PRDI, in pGP570, with thrombin cleavage site), available in Stülke lab
- pGP443 (PRDII, in pGP570, with thrombin cleavage site), available in Stülke lab
- pGP575 (amino acids 1-60, RNA-binding domain with Strep-tag, in pGP574), available in Stülke lab
- lacZ fusion:
- GFP fusion:
- Antibody:
Labs working on this gene/protein
Jörg Stülke, University of Göttingen, Germany Homepage
Your additional remarks
References
Reviews
Original publications