Difference between revisions of "RipX"

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(Expression and regulation)
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* '''Operon:'''  
 
* '''Operon:'''  
  
* '''[[Sigma factor]]:''' [[SigF]] {{PubMed|15699190}}
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* '''[[Sigma factor]]:'''  
  
 
* '''Regulation:'''  
 
* '''Regulation:'''  
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* '''Regulatory mechanism:'''  
 
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* '''Additional information:'''  
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=Biological materials =
 
=Biological materials =

Revision as of 20:37, 5 July 2010

  • Description: site-specific integrase/recombinase

Gene name ripX
Synonyms ykqM
Essential no
Product site-specific integrase/recombinase
Function chromosome partitioning
MW, pI 33 kDa, 10
Gene length, protein length 888 bp, 296 aa
Immediate neighbours drm, fur
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
RipX context.gif
This image was kindly provided by SubtiList





The gene

Basic information

  • Locus tag: BSU23510

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: XerD subfamily (according to Swiss-Prot)
  • Paralogous protein(s): CodV

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization: cytoplasm (according to Swiss-Prot)

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References