Difference between revisions of "NtdR"
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| − | * '''Description:''' transcription activator of the ''[[ntdA]]-[[ntdB]]-[[ntdC]]'' operon <br/><br/> | + | * '''Description:''' transcription activator of the ''[[ntdA]]-[[ntdB]]-[[ntdC]]-[[glcP]]'' operon <br/><br/> |
{| align="right" border="1" cellpadding="2" | {| align="right" border="1" cellpadding="2" | ||
| Line 12: | Line 12: | ||
|style="background:#ABCDEF;" align="center"| '''Product''' || transcriptional regulator ([[LacI family]]) | |style="background:#ABCDEF;" align="center"| '''Product''' || transcriptional regulator ([[LacI family]]) | ||
|- | |- | ||
| − | |style="background:#ABCDEF;" align="center"|'''Function''' || regulation of the ''[[ntdA]]-[[ntdB]]-[[ntdC]]'' operon | + | |style="background:#ABCDEF;" align="center"|'''Function''' || regulation of the ''[[ntdA]]-[[ntdB]]-[[ntdC]]-[[glcP]]'' operon |
|- | |- | ||
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 37 kDa, 6.645 | |style="background:#ABCDEF;" align="center"| '''MW, pI''' || 37 kDa, 6.645 | ||
| Line 52: | Line 52: | ||
=== Basic information/ Evolution === | === Basic information/ Evolution === | ||
| − | * '''Catalyzed reaction/ biological activity:''' | + | * '''Catalyzed reaction/ biological activity:''' transcription activation of the ''[[ntdA]]-[[ntdB]]-[[ntdC]]-[[glcP]]'' operon {{PubMed|17056753}} |
* '''Protein family:''' [[LacI family]] | * '''Protein family:''' [[LacI family]] | ||
| Line 118: | Line 118: | ||
=References= | =References= | ||
| − | <pubmed>14612444 </pubmed> | + | <pubmed>14612444 17056753 </pubmed> |
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] | ||
Revision as of 19:58, 30 May 2010
| Gene name | ntdR |
| Synonyms | yhjM |
| Essential | no |
| Product | transcriptional regulator (LacI family) |
| Function | regulation of the ntdA-ntdB-ntdC-glcP operon |
| MW, pI | 37 kDa, 6.645 |
| Gene length, protein length | 987 bp, 329 aa |
| Immediate neighbours | ntdA, yhjN |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
| |
Contents
The gene
Basic information
- Locus tag: BSU10560
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: transcription activation of the ntdA-ntdB-ntdC-glcP operon PubMed
- Protein family: LacI family
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization:
Database entries
- Structure:
- UniProt: O07567
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Operon: ntdR PubMed
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Takashi Inaoka, Kozo Ochi
Glucose uptake pathway-specific regulation of synthesis of neotrehalosadiamine, a novel autoinducer produced in Bacillus subtilis.
J Bacteriol: 2007, 189(1);65-75
[PubMed:17056753]
[WorldCat.org]
[DOI]
(P p)
Takashi Inaoka, Kosaku Takahashi, Hiroshi Yada, Mitsuru Yoshida, Kozo Ochi
RNA polymerase mutation activates the production of a dormant antibiotic 3,3'-neotrehalosadiamine via an autoinduction mechanism in Bacillus subtilis.
J Biol Chem: 2004, 279(5);3885-92
[PubMed:14612444]
[WorldCat.org]
[DOI]
(P p)
