Difference between revisions of "SlrA"
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| − | * '''Description:''' anti-repressor, antagonist of [[SinR]], involved in control of flagellar genes and eps and yqxM operons <br/><br/> | + | * '''Description:''' anti-repressor, antagonist of [[SinR]], involved in control of flagellar genes and ''[[epsA|eps]]'' and ''[[yqxM]]-[[sipW]]-[[tasA]]'' operons <br/><br/> |
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=== Basic information/ Evolution === | === Basic information/ Evolution === | ||
| − | * '''Catalyzed reaction/ biological activity:''' | + | * '''Catalyzed reaction/ biological activity:''' binding of [[SinR]] resulting in induction of [[SinR]]-repressed genes and operons {{PubMed|19788541}} |
* '''Protein family:''' | * '''Protein family:''' | ||
| Line 96: | Line 96: | ||
* '''Regulatory mechanism:''' | * '''Regulatory mechanism:''' | ||
| + | ** [[YwcC]]: transcription repression {{PubMed|18647168,19788541}} | ||
* '''Additional information:''' | * '''Additional information:''' | ||
Revision as of 09:48, 30 December 2009
- Description: anti-repressor, antagonist of SinR, involved in control of flagellar genes and eps and yqxM-sipW-tasA operons
| Gene name | slrA |
| Synonyms | |
| Essential | no |
| Product | antagonist of SinR |
| Function | regulation of biofilm formation |
| MW, pI | xx,x kDa, y.yy |
| Gene length, protein length | 156 bp, 52 aa |
| Immediate neighbours | ywcC, ywcB |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
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Contents
The gene
Basic information
- Locus tag:
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry:
Additional information
This gene was only recently identified. PubMed
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: binding of SinR resulting in induction of SinR-repressed genes and operons PubMed
- Protein family:
- Paralogous protein(s): SinI
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Localization:
Database entries
- Structure:
- UniProt: P0C8M5
- KEGG entry: no entry
- E.C. number:
Additional information
Expression and regulation
- Operon:
- Regulation:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
