Difference between revisions of "YngI"
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| − | * '''Description:''' aceto- | + | * '''Description:''' aceto-acetate-CoA ligase <br/><br/> |
{| align="right" border="1" cellpadding="2" | {| align="right" border="1" cellpadding="2" | ||
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|style="background:#ABCDEF;" align="center"| '''Essential''' || no | |style="background:#ABCDEF;" align="center"| '''Essential''' || no | ||
|- | |- | ||
| − | |style="background:#ABCDEF;" align="center"| '''Product''' || aceto- | + | |style="background:#ABCDEF;" align="center"| '''Product''' || aceto-acetate-CoA ligase |
|- | |- | ||
|style="background:#ABCDEF;" align="center"|'''Function''' || mother cell metabolism, leucine utilization | |style="background:#ABCDEF;" align="center"|'''Function''' || mother cell metabolism, leucine utilization | ||
| Line 52: | Line 52: | ||
=== Basic information/ Evolution === | === Basic information/ Evolution === | ||
| − | * '''Catalyzed reaction/ biological activity:''' | + | * '''Catalyzed reaction/ biological activity:''' ATP + acetoacetate + CoA <=> AMP + diphosphate + acetoacetyl-CoA {{PubMed|19935659}} |
* '''Protein family:''' | * '''Protein family:''' | ||
| Line 118: | Line 118: | ||
=References= | =References= | ||
| − | <pubmed>15699190,12662922 </pubmed> | + | <pubmed>15699190,12662922 19935659 </pubmed> |
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] | ||
Revision as of 16:10, 26 November 2009
- Description: aceto-acetate-CoA ligase
| Gene name | yngI |
| Synonyms | |
| Essential | no |
| Product | aceto-acetate-CoA ligase |
| Function | mother cell metabolism, leucine utilization |
| MW, pI | 61 kDa, 5.978 |
| Gene length, protein length | 1647 bp, 549 aa |
| Immediate neighbours | yngH, yngJ |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
| |
Contents
The gene
Basic information
- Coordinates:
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: ATP + acetoacetate + CoA <=> AMP + diphosphate + acetoacetyl-CoA PubMed
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization:
Database entries
- Structure:
- UniProt: O31826
- KEGG entry: [3]
- E.C. number: 6.2.1.16
Additional information
Expression and regulation
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Tzu-Lin Hsiao, Olga Revelles, Lifeng Chen, Uwe Sauer, Dennis Vitkup
Automatic policing of biochemical annotations using genomic correlations.
Nat Chem Biol: 2010, 6(1);34-40
[PubMed:19935659]
[WorldCat.org]
[DOI]
(I p)
Leif Steil, Mónica Serrano, Adriano O Henriques, Uwe Völker
Genome-wide analysis of temporally regulated and compartment-specific gene expression in sporulating cells of Bacillus subtilis.
Microbiology (Reading): 2005, 151(Pt 2);399-420
[PubMed:15699190]
[WorldCat.org]
[DOI]
(P p)
Patrick Eichenberger, Shane T Jensen, Erin M Conlon, Christiaan van Ooij, Jessica Silvaggi, José Eduardo González-Pastor, Masaya Fujita, Sigal Ben-Yehuda, Patrick Stragier, Jun S Liu, Richard Losick
The sigmaE regulon and the identification of additional sporulation genes in Bacillus subtilis.
J Mol Biol: 2003, 327(5);945-72
[PubMed:12662922]
[WorldCat.org]
[DOI]
(P p)
