Difference between revisions of "ScoC"
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=Expression and regulation= | =Expression and regulation= | ||
| − | * '''Operon:''' | + | * '''Operon:''' ''scoC'' {{PubMed|3131303}} |
* '''[[Sigma factor]]:''' | * '''[[Sigma factor]]:''' | ||
* '''Regulation:''' | * '''Regulation:''' | ||
| − | ** expressed upon transition into the stationary phase ([[AbrB]]) | + | ** expressed upon transition into the stationary phase ([[AbrB]]) {{PubMed|2504584}} |
* '''Regulatory mechanism:''' | * '''Regulatory mechanism:''' | ||
| − | ** [[AbrB]]: transcription activation [ | + | ** [[AbrB]]: transcription activation {{PubMed|2504584}} |
| + | ** [[SenS]]: positive regulation {{PubMed|16321961}} | ||
| + | ** [[SalA]]: negative regulation {{PubMed|15126467}} | ||
| − | * '''Additional information:''' | + | * '''Additional information:''' |
=Biological materials = | =Biological materials = | ||
Revision as of 19:40, 5 September 2009
- Description: transcriptional repressor of sporulation and extracellular proteases genes (aprE), represses also hag and flgM expression
| Gene name | scoC |
| Synonyms | hpr, catA |
| Essential | no |
| Product | transcriptional repressor (MarR family) |
| Function | regulation of sporulation and degradative enzyme genes |
| MW, pI | 23 kDa, 5.188 |
| Gene length, protein length | 609 bp, 203 aa |
| Immediate neighbours | yhaI, yhaH |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
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Contents
The gene
Basic information
- Locus tag: BSU09990
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Localization:
Database entries
- Structure: 2FXA
- UniProt: P11065
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Operon: scoC PubMed
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
