Difference between revisions of "ParB"

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Line 84: Line 84:
 
* '''Structure:'''
 
* '''Structure:'''
  
* '''Swiss prot entry:''' [http://www.uniprot.org/uniprot/P26497 P26497]
+
* '''UniProt:''' [http://www.uniprot.org/uniprot/P26497 P26497]
  
 
* '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu:BSU40960]
 
* '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu:BSU40960]

Revision as of 15:30, 20 July 2009

  • Description: chromosome positioning near the pole and transport through the polar septum / antagonist of Soj-dependent inhibition of sporulation initiation

Gene name spo0J
Synonyms spo0JB
Essential no
Product site-specific DNA-binding protein
Function chromosome positioning before asymmetric septation,

specifying its orientation, and imposing directionality on

its subsequent transport through the septum; required for sporulation

(antagonist of Soj-dependent inhibition of sporulation initiation)

MW, pI 32 kDa, 8.417
Gene length, protein length 846 bp, 282 aa
Immediate neighbours yyaC, soj
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
Spo0J context.gif
This image was kindly provided by SubtiList



The gene

Basic information

  • Locus tag: BSU40960

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: parB family (according to Swiss-Prot)
  • Paralogous protein(s): Noc

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Regulation:
    • repressed under conditions that trigger sporulation (Spo0A) PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Nora L Sullivan, Kathleen A Marquis, David Z Rudner
Recruitment of SMC by ParB-parS organizes the origin region and promotes efficient chromosome segregation.
Cell: 2009, 137(4);697-707
[PubMed:19450517] [WorldCat.org] [DOI] (I p)

Stephan Gruber, Jeff Errington
Recruitment of condensin to replication origin regions by ParB/SpoOJ promotes chromosome segregation in B. subtilis.
Cell: 2009, 137(4);685-96
[PubMed:19450516] [WorldCat.org] [DOI] (I p)

Heath Murray, Jeff Errington
Dynamic control of the DNA replication initiation protein DnaA by Soj/ParA.
Cell: 2008, 135(1);74-84
[PubMed:18854156] [WorldCat.org] [DOI] (I p)

Heath Murray, Henrique Ferreira, Jeff Errington
The bacterial chromosome segregation protein Spo0J spreads along DNA from parS nucleation sites.
Mol Microbiol: 2006, 61(5);1352-61
[PubMed:16925562] [WorldCat.org] [DOI] (P p)

Gonçalo Real, Sabine Autret, Elizabeth J Harry, Jeffery Errington, Adriano O Henriques
Cell division protein DivIB influences the Spo0J/Soj system of chromosome segregation in Bacillus subtilis.
Mol Microbiol: 2005, 55(2);349-67
[PubMed:15659156] [WorldCat.org] [DOI] (P p)

Virginie Molle, Masaya Fujita, Shane T Jensen, Patrick Eichenberger, José E González-Pastor, Jun S Liu, Richard Losick
The Spo0A regulon of Bacillus subtilis.
Mol Microbiol: 2003, 50(5);1683-701
[PubMed:14651647] [WorldCat.org] [DOI] (P p)

Ling Juan Wu, Jeff Errington
RacA and the Soj-Spo0J system combine to effect polar chromosome segregation in sporulating Bacillus subtilis.
Mol Microbiol: 2003, 49(6);1463-75
[PubMed:12950914] [WorldCat.org] [DOI] (P p)

S Autret, R Nair, J Errington
Genetic analysis of the chromosome segregation protein Spo0J of Bacillus subtilis: evidence for separate domains involved in DNA binding and interactions with Soj protein.
Mol Microbiol: 2001, 41(3);743-55
[PubMed:11532141] [WorldCat.org] [DOI] (P p)

A A Teleman, P L Graumann, D C Lin, A D Grossman, R Losick
Chromosome arrangement within a bacterium.
Curr Biol: 1998, 8(20);1102-9
[PubMed:9778525] [WorldCat.org] [DOI] (P p)

M A Cervin, G B Spiegelman, B Raether, K Ohlsen, M Perego, J A Hoch
A negative regulator linking chromosome segregation to developmental transcription in Bacillus subtilis.
Mol Microbiol: 1998, 29(1);85-95
[PubMed:9701805] [WorldCat.org] [DOI] (P p)

C D Webb, P L Graumann, J A Kahana, A A Teleman, P A Silver, R Losick
Use of time-lapse microscopy to visualize rapid movement of the replication origin region of the chromosome during the cell cycle in Bacillus subtilis.
Mol Microbiol: 1998, 28(5);883-92
[PubMed:9663676] [WorldCat.org] [DOI] (P p)

P J Lewis, J Errington
Direct evidence for active segregation of oriC regions of the Bacillus subtilis chromosome and co-localization with the SpoOJ partitioning protein.
Mol Microbiol: 1997, 25(5);945-54
[PubMed:9364919] [WorldCat.org] [DOI] (P p)

P Glaser, M E Sharpe, B Raether, M Perego, K Ohlsen, J Errington
Dynamic, mitotic-like behavior of a bacterial protein required for accurate chromosome partitioning.
Genes Dev: 1997, 11(9);1160-8
[PubMed:9159397] [WorldCat.org] [DOI] (P p)

M E Sharpe, J Errington
The Bacillus subtilis soj-spo0J locus is required for a centromere-like function involved in prespore chromosome partitioning.
Mol Microbiol: 1996, 21(3);501-9
[PubMed:8866474] [WorldCat.org] [DOI] (P p)

T H Mysliwiec, J Errington, A B Vaidya, M G Bramucci
The Bacillus subtilis spo0J gene: evidence for involvement in catabolite repression of sporulation.
J Bacteriol: 1991, 173(6);1911-9
[PubMed:1900505] [WorldCat.org] [DOI] (P p)