Difference between revisions of "Nth"
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* '''Structure:''' [http://www.rcsb.org/pdb/explore.do?structureId=1P59 1P59] (complex with DNA, Geobacillus stearothermophilus) | * '''Structure:''' [http://www.rcsb.org/pdb/explore.do?structureId=1P59 1P59] (complex with DNA, Geobacillus stearothermophilus) | ||
| − | * ''' | + | * '''UniProt:''' [http://www.uniprot.org/uniprot/P39788 P39788] |
* '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu:BSU22340] | * '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu:BSU22340] | ||
Revision as of 13:17, 20 July 2009
- Description: endonuclease III
| Gene name | nth |
| Synonyms | jooB, ypoB |
| Essential | no |
| Product | endonuclease III |
| Function | DNA repair |
| MW, pI | 24 kDa, 9.277 |
| Gene length, protein length | 657 bp, 219 aa |
| Immediate neighbours | ypoC, dnaD |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
| |
Contents
The gene
Basic information
- Locus tag: BSU22340
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: The C-O-P bond 3' to the apurinic or apyrimidinic site in DNA is broken by a beta-elimination reaction, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate (according to Swiss-Prot)
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization:
Database entries
- Structure: 1P59 (complex with DNA, Geobacillus stearothermophilus)
- UniProt: P39788
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Operon:
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
