Difference between revisions of "Ddl"
| Line 35: | Line 35: | ||
=== Basic information === | === Basic information === | ||
| − | * '''Locus tag:''' | + | * '''Locus tag:''' BSU04560 |
===Phenotypes of a mutant === | ===Phenotypes of a mutant === | ||
| Line 82: | Line 82: | ||
* '''Swiss prot entry:''' [http://www.uniprot.org/uniprot/P96612 P96612] | * '''Swiss prot entry:''' [http://www.uniprot.org/uniprot/P96612 P96612] | ||
| − | * '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu+ | + | * '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu+BSU04560] |
* '''E.C. number:''' [http://www.expasy.org/enzyme/6.3.2.4 6.3.2.4] | * '''E.C. number:''' [http://www.expasy.org/enzyme/6.3.2.4 6.3.2.4] | ||
Revision as of 13:42, 3 June 2009
- Description: D-alanine-D-alanine ligase
| Gene name | ddl |
| Synonyms | ddlA |
| Essential | yes PubMed |
| Product | D-alanine-D-alanine ligase |
| Function | peptidoglycan precursor biosynthesis |
| MW, pI | 38 kDa, 4.58 |
| Gene length, protein length | 1062 bp, 354 aa |
| Immediate neighbours | ydbP, murF |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
| |
Contents
The gene
Basic information
- Locus tag: BSU04560
Phenotypes of a mutant
essential PubMed
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: ATP + 2 D-alanine = ADP + phosphate + D-alanyl-D-alanine (according to Swiss-Prot)
- Protein family: ATP-grasp domain (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization: cytoplasm (according to Swiss-Prot)
Database entries
- Structure:
- Swiss prot entry: P96612
- KEGG entry: [2]
- E.C. number: 6.3.2.4
Additional information
Expression and regulation
- Operon:
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
- Author1, Author2 & Author3 (year) Title Journal volume: page-page. PubMed
