Difference between revisions of "YcbJ"

From SubtiWiki
Jump to: navigation, search
Line 35: Line 35:
 
=== Basic information ===
 
=== Basic information ===
  
* '''Locus tag:'''
+
* '''Locus tag:''' BSU02520
  
 
===Phenotypes of a mutant ===
 
===Phenotypes of a mutant ===
Line 80: Line 80:
 
* '''Swiss prot entry:''' [http://www.uniprot.org/uniprot/P42242 P42242]
 
* '''Swiss prot entry:''' [http://www.uniprot.org/uniprot/P42242 P42242]
  
* '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu+BSU02520 BSU02520]
+
* '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu+BSU02520]
  
 
* '''E.C. number:'''
 
* '''E.C. number:'''

Revision as of 12:21, 3 June 2009

  • Description: similar to macrolide 2'-phosphotransferase

Gene name ycbJ
Synonyms
Essential no
Product unknown
Function unknown
MW, pI 34 kDa, 4.565
Gene length, protein length 918 bp, 306 aa
Immediate neighbours ycbH, rtpA
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YcbJ context.gif
This image was kindly provided by SubtiList



The gene

Basic information

  • Locus tag: BSU02520

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: aminoglycoside phosphotransferase family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation: induced by D-glucarate/galactarate (YcbG) PubMed
  • Regulatory mechanism: YcbG: transcription repression PubMed
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

  1. Author1, Author2 & Author3 (year) Title Journal volume: page-page. PubMed