Difference between revisions of "SinR"

From SubtiWiki
Jump to: navigation, search
(Genes controlled by SinR)
(Genes controlled by SinR)
Line 62: Line 62:
 
* '''Activation by SinR:''' ''[[comK]]''
 
* '''Activation by SinR:''' ''[[comK]]''
  
* '''Repression by SinR:''' ''[[aprE]], [[kinB]], ''[[rapG]]'' [http://www.ncbi.nlm.nih.gov/sites/entrez/16430695 PubMed], [[sigD]], [[spo0A]]'',''[[spoIIAA]]-[[spoIIAB]]-[[sigF]]'', ''[[spoIIE]]'', ''[[spoIIGA]]-[[sigE]]-[[sigG]]'', ''[[spoVG]]'' [http://www.ncbi.nlm.nih.gov/sites/entrez/16430695 PubMed], ''[[yqxM]]-[[sipW]]-[[tasA]]'' [http://www.ncbi.nlm.nih.gov/sites/entrez/16430695 PubMed]
+
* '''Repression by SinR:''' ''[[aprE]], [[kinB]], ''[[rapG]]'' [http://www.ncbi.nlm.nih.gov/sites/entrez/16430695 PubMed], [[sigD]], [[spo0A]]'',''[[spoIIAA]]-[[spoIIAB]]-[[sigF]]'', ''[[spoIIE]]'', ''[[spoIIGA]]-[[sigE]]-[[sigG]]'', ''[[spoVG]]'' [http://www.ncbi.nlm.nih.gov/sites/entrez/16430695 PubMed], ''[[yqxM]]-[[sipW]]-[[tasA]]'' [http://www.ncbi.nlm.nih.gov/sites/entrez/16430695 PubMed], ''[[yvgN]]'' [http://www.ncbi.nlm.nih.gov/sites/entrez/16430695 PubMed], ''[[ywbD]]'' [http://www.ncbi.nlm.nih.gov/sites/entrez/16430695 PubMed]
  
 
=== Extended information on the protein ===
 
=== Extended information on the protein ===

Revision as of 17:53, 2 May 2009

  • Description: transcriptional regulator of post-exponential-phase responses genes

Gene name sinR
Synonyms sin, flaD
Essential no
Product transcriptional regulator of post-exponential-phase responses genes
Function regulation of post-exponential gene expression
MW, pI 12 kDa, 7.177
Gene length, protein length 333 bp, 111 aa
Immediate neighbours sinI, tasA
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
SinR context.gif
This image was kindly provided by SubtiList



The gene

Basic information

  • Coordinates:

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s): SlrR

Genes controlled by SinR

  • Activation by SinR: comK

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Localization:

Database entries

  • Structure:
  • Swiss prot entry:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

  1. Author1, Author2 & Author3 (year) Title Journal volume: page-page. PubMed