Difference between revisions of "Sandbox"

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* '''Description:''' 16S rRNA<br/><br/>
 
  
{| align="right" border="1" cellpadding="2"
 
|-
 
|style="background:#ABCDEF;" align="center"|'''Gene name'''
 
|''rrnO-16S''
 
|-
 
|style="background:#ABCDEF;" align="center"| '''Synonyms''' || '' ''
 
|-
 
|style="background:#ABCDEF;" align="center"| '''Essential''' || no
 
|-
 
|style="background:#ABCDEF;" align="center"| '''Product''' || ribosomal RNA-16S
 
|-
 
|style="background:#ABCDEF;" align="center"|'''Function''' || translation
 
|-
 
|style="background:#ABCDEF;" align="center"| '''Gene length''' || 1553 bp
 
|-|-
 
 
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[gyrA]]'', ''[[trnO-Ile]]''
 
|-
 
|style="background:#FAF8CC;" align="center"|'''[http://subtiwiki.uni-goettingen.de/rrnO-16S_nucleotide.txt    Gene sequence      (+200bp)  ]'''
 
|style="background:#FAF8CC;" align="center"|'''  '''
 
|-
 
|colspan="2" | '''Genetic context''' <br/> [[Image:rrnO-16S_context.gif]]
 
|-
 
|}
 
 
__TOC__
 
 
<br/><br/><br/><br/>
 
 
=The gene=
 
 
=== Basic information ===
 
 
* '''Coordinates:'''
 
 
===Phenotypes of a mutant ===
 
 
=== Database entries ===
 
 
* '''DBTBS entry:''' no entry
 
 
* '''SubtiList entry:''' [http://genolist.pasteur.fr/SubtiList/genome.cgi?gene_detail+BG00005]
 
 
* '''Structure:'''
 
 
=== Additional information===
 
 
=Expression and regulation=
 
 
* '''Operon:''' ''rrnO'' operon (''[[rrnO-16S]] - [[trnO-Ile]] - [[trnO-Ala]] -[[rrnO-23S]] - [[rrnO-5S]]'') [http://www.ncbi.nlm.nih.gov/sites/entrez/6312418 PubMed]
 
 
* '''Sigma factor:''' [[SigA]] [http://www.ncbi.nlm.nih.gov/sites/entrez/6312418 PubMed]
 
 
* '''Regulation:'''
 
 
* '''Regulatory mechanism:'''
 
 
* '''Additional information:'''
 
 
=Biological materials =
 
 
* '''Mutant:'''
 
 
* '''Expression vector:'''
 
       
 
* '''lacZ fusion:'''
 
 
* '''GFP fusion:'''
 
 
* '''two-hybrid system:'''
 
 
* '''Antibody:'''
 
 
=Labs working on this gene/protein=
 
 
=Your additional remarks=
 
 
=References=
 
 
# Ogasawara et al. (1983) Structure and organization of rRNA operons in the region of the replication origin of the ''Bacillus subtilis'' chromosome.''Nucl. Acids Res.'' '''11:''' 6301-6318. [http://www.ncbi.nlm.nih.gov/sites/entrez/6312418 PubMed]
 

Revision as of 16:24, 11 March 2009