YdbM

• Description: acyl-CoA dehydrogenase
  
  

Gene name	ydbM
Synonyms
Essential	no
Product	acyl-CoA dehydrogenase
Function	sulphur metabolism
Gene expression levels in SubtiExpress: ydbM
MW, pI	41 kDa, 5.721
Gene length, protein length	1143 bp, 381 aa
Immediate neighbours	ydbL, fbpB
Sequences	Protein DNA DNA_with_flanks
Genetic context This image was kindly provided by SubtiList
Expression at a glance   PubMed

Categories containing this gene/protein

poorly characterized/ putative enzymes

This gene is a member of the following regulons

CymR regulon

The gene

Basic information

• Locus tag: BSU04520

Database entries

• BsubCyc: BSU04520

• DBTBS entry: [1]

• SubtiList entry: [2]

The protein

Basic information/ Evolution

• Catalyzed reaction/ biological activity:

• Protein family: acyl-CoA dehydrogenase family (according to Swiss-Prot)

• Paralogous protein(s):

Extended information on the protein

• Kinetic information:

• Domains:

• Modification:

• Cofactor(s):

• Effectors of protein activity:

• Interactions:

• Localization:

Database entries

• BsubCyc: BSU04520

• Structure:

• UniProt: P96608

• KEGG entry: [3]

• E.C. number:

Expression and regulation

• Operon: ydbM (according to DBTBS)

• Expression browser: ydbM PubMed

• Sigma factor:

• Regulation:
  • repressed in the presence of cysteine (CymR) PubMed

• Regulatory mechanism:
  • CymR: transcription repression PubMed

• Additional information:
  • number of protein molecules per cell (minimal medium with glucose and ammonium): 82 PubMed

Biological materials

• Mutant:

• Expression vector:

• lacZ fusion:

• GFP fusion:

• two-hybrid system:

• Antibody:

References

Sergine Even, Pierre Burguière, Sandrine Auger, Olga Soutourina, Antoine Danchin, Isabelle Martin-Verstraete
Global control of cysteine metabolism by CymR in Bacillus subtilis.
J Bacteriol: 2006, 188(6);2184-97
[PubMed:16513748] [WorldCat.org] [DOI] (P p)