Paper

• strongly repressed in response to glucose starvation in M9 medium PubMed: hupA cycC

not yet in SubtiWiki

Konstantinos Papakostas, Maria Botou, Stathis Frillingos
Functional identification of the hypoxanthine/guanine transporters YjcD and YgfQ and the adenine transporters PurP and YicO of Escherichia coli K-12.
J Biol Chem: 2013, 288(52);36827-40
[PubMed:24214977] [WorldCat.org] [DOI] (I p)

Bernadette Henares, Sushma Kommineni, Onuma Chumsakul, Naotake Ogasawara, Shu Ishikawa, Michiko M Nakano
The ResD response regulator, through functional interaction with NsrR and fur, plays three distinct roles in Bacillus subtilis transcriptional control.
J Bacteriol: 2014, 196(2);493-503
[PubMed:24214949] [WorldCat.org] [DOI] (I p)

Zhong Ni, Rongzhong Jin, Huayou Chen, Xianfu Lin
Just an additional hydrogen bond can dramatically reduce the catalytic activity of Bacillus subtilis lipase A I12T mutant: an integration of computational modeling and experimental analysis.
Comput Biol Med: 2013, 43(11);1882-8
[PubMed:24209933] [WorldCat.org] [DOI] (I p)

Sabine Pérès, Liza Felicori, Franck Molina
Elementary flux modes analysis of functional domain networks allows a better metabolic pathway interpretation.
PLoS One: 2013, 8(10);e76143
[PubMed:24204596] [WorldCat.org] [DOI] (I e)

Harsimran Singh, Yuyuan Dai, F Wayne Outten, Laura S Busenlehner
Escherichia coli SufE sulfur transfer protein modulates the SufS cysteine desulfurase through allosteric conformational dynamics.
J Biol Chem: 2013, 288(51);36189-200
[PubMed:24196966] [WorldCat.org] [DOI] (I p)

Öykü İrigül-Sönmez, Türkan E Köroğlu, Büşra Öztürk, Ákos T Kovács, Oscar P Kuipers, Ayten Yazgan-Karataş
In Bacillus subtilis LutR is part of the global complex regulatory network governing the adaptation to the transition from exponential growth to stationary phase.
Microbiology (Reading): 2014, 160(Pt 2);243-260
[PubMed:24196425] [WorldCat.org] [DOI] (I p)

Caroline Köhrer, Debabrata Mandal, Kirk W Gaston, Henri Grosjean, Patrick A Limbach, Uttam L Rajbhandary
Life without tRNAIle-lysidine synthetase: translation of the isoleucine codon AUA in Bacillus subtilis lacking the canonical tRNA2Ile.
Nucleic Acids Res: 2014, 42(3);1904-15
[PubMed:24194599] [WorldCat.org] [DOI] (I p)

Vandana Chakravartty, John E Cronan
The wing of a winged helix-turn-helix transcription factor organizes the active site of BirA, a bifunctional repressor/ligase.
J Biol Chem: 2013, 288(50);36029-39
[PubMed:24189073] [WorldCat.org] [DOI] (I p)

Ailar Jamalli, Agnès Hébert, Léna Zig, Harald Putzer
Control of expression of the RNases J1 and J2 in Bacillus subtilis.
J Bacteriol: 2014, 196(2);318-24
[PubMed:24187087] [WorldCat.org] [DOI] (I p)

Carol Vargas-Bautista, Kathryn Rahlwes, Paul Straight
Bacterial competition reveals differential regulation of the pks genes by Bacillus subtilis.
J Bacteriol: 2014, 196(4);717-28
[PubMed:24187085] [WorldCat.org] [DOI] (I p)

Robyn T Eijlander, Anne de Jong, Antonina O Krawczyk, Siger Holsappel, Oscar P Kuipers
SporeWeb: an interactive journey through the complete sporulation cycle of Bacillus subtilis.
Nucleic Acids Res: 2014, 42(Database issue);D685-91
[PubMed:24170806] [WorldCat.org] [DOI] (I p)

Jessica M Mann, Valerie J Carabetta, Ileana M Cristea, David Dubnau
Complex formation and processing of the minor transformation pilins of Bacillus subtilis.
Mol Microbiol: 2013, 90(6);1201-15
[PubMed:24164455] [WorldCat.org] [DOI] (I p)

David Noone, Letal I Salzberg, Eric Botella, Katrin Bäsell, Dörte Becher, Haike Antelmann, Kevin M Devine
A highly unstable transcript makes CwlO D,L-endopeptidase expression responsive to growth conditions in Bacillus subtilis.
J Bacteriol: 2014, 196(2);237-47
[PubMed:24163346] [WorldCat.org] [DOI] (I p)

Christine Diethmaier, Joseph A Newman, Akos T Kovács, Volkhard Kaever, Christina Herzberg, Cecilia Rodrigues, Mirjam Boonstra, Oscar P Kuipers, Richard J Lewis, Jörg Stülke
The YmdB phosphodiesterase is a global regulator of late adaptive responses in Bacillus subtilis.
J Bacteriol: 2014, 196(2);265-75
[PubMed:24163345] [WorldCat.org] [DOI] (I p)

Allison Kriel, Shaun R Brinsmade, Jessica L Tse, Ashley K Tehranchi, Alycia N Bittner, Abraham L Sonenshein, Jue D Wang
GTP dysregulation in Bacillus subtilis cells lacking (p)ppGpp results in phenotypic amino acid auxotrophy and failure to adapt to nutrient downshift and regulate biosynthesis genes.
J Bacteriol: 2014, 196(1);189-201
[PubMed:24163341] [WorldCat.org] [DOI] (I p)

Xiao Lan Xu, Gregory A Grant
Identification and characterization of two new types of bacterial L-serine dehydratases and assessment of the function of the ACT domain.
Arch Biochem Biophys: 2013, 540(1-2);62-9
[PubMed:24161940] [WorldCat.org] [DOI] (I p)

David S Murray, Nagababu Chinnam, Nam Ky Tonthat, Travis Whitfill, Lewis V Wray, Susan H Fisher, Maria A Schumacher
Structures of the Bacillus subtilis glutamine synthetase dodecamer reveal large intersubunit catalytic conformational changes linked to a unique feedback inhibition mechanism.
J Biol Chem: 2013, 288(50);35801-11
[PubMed:24158439] [WorldCat.org] [DOI] (I p)

Cuauhtemoc Licona-Cassani, Alvaro R Lara, Natividad Cabrera-Valladares, Adelfo Escalante, Georgina Hernández-Chávez, Alfredo Martinez, Francisco Bolívar, Guillermo Gosset
Inactivation of pyruvate kinase or the phosphoenolpyruvate: sugar phosphotransferase system increases shikimic and dehydroshikimic acid yields from glucose in Bacillus subtilis.
J Mol Microbiol Biotechnol: 2014, 24(1);37-45
[PubMed:24158146] [WorldCat.org] [DOI] (I p)

Victoria L Marlow, Francesca R Cianfanelli, Michael Porter, Lynne S Cairns, J Kim Dale, Nicola R Stanley-Wall
The prevalence and origin of exoprotease-producing cells in the Bacillus subtilis biofilm.
Microbiology (Reading): 2014, 160(Pt 1);56-66
[PubMed:24149708] [WorldCat.org] [DOI] (I p)

Emma J Gwynn, Abigail J Smith, Colin P Guy, Nigel J Savery, Peter McGlynn, Mark S Dillingham
The conserved C-terminus of the PcrA/UvrD helicase interacts directly with RNA polymerase.
PLoS One: 2013, 8(10);e78141
[PubMed:24147116] [WorldCat.org] [DOI] (I e)

Adrienne Zaprasis, Tamara Hoffmann, Lorena Stannek, Katrin Gunka, Fabian M Commichau, Erhard Bremer
The γ-aminobutyrate permease GabP serves as the third proline transporter of Bacillus subtilis.
J Bacteriol: 2014, 196(3);515-26
[PubMed:24142252] [WorldCat.org] [DOI] (I p)

Jana Kumpfmüller, Johannes Kabisch, Thomas Schweder
An optimized technique for rapid genome modifications of Bacillus subtilis.
J Microbiol Methods: 2013, 95(3);350-2
[PubMed:24140578] [WorldCat.org] [DOI] (I p)

Vivianne J Goosens, Carmine G Monteferrante, Jan Maarten van Dijl
The Tat system of Gram-positive bacteria.
Biochim Biophys Acta: 2014, 1843(8);1698-706
[PubMed:24140208] [WorldCat.org] [DOI] (P p)

Kamil Górecki, Cecilia Hägerhäll, Torbjörn Drakenberg
The Na+ transport in gram-positive bacteria defect in the Mrp antiporter complex measured with 23Na nuclear magnetic resonance.
Anal Biochem: 2014, 445;80-6
[PubMed:24139955] [WorldCat.org] [DOI] (I p)

Xidan Deng, Yunxia Tian, Qiuhong Niu, Xiao'e Xu, Hui Shi, Hanbo Zhang, Lianming Liang, Keqin Zhang, Xiaowei Huang
The ComP-ComA quorum system is essential for "Trojan horse" like pathogenesis in Bacillus nematocida.
PLoS One: 2013, 8(10);e76920
[PubMed:24130811] [WorldCat.org] [DOI] (I e)

Sutharsan Govindarajan, Yair Elisha, Keren Nevo-Dinur, Orna Amster-Choder
The general phosphotransferase system proteins localize to sites of strong negative curvature in bacterial cells.
mBio: 2013, 4(5);e00443-13
[PubMed:24129255] [WorldCat.org] [DOI] (I e)

Raji Edayathumangalam, Rui Wu, Roman Garcia, Yuguang Wang, Wei Wang, Cheryl A Kreinbring, Alicia Bach, Jingling Liao, Todd A Stone, Thomas C Terwilliger, Quyen Q Hoang, Boris R Belitsky, Gregory A Petsko, Dagmar Ringe, Dali Liu
Crystal structure of Bacillus subtilis GabR, an autorepressor and transcriptional activator of gabT.
Proc Natl Acad Sci U S A: 2013, 110(44);17820-5
[PubMed:24127574] [WorldCat.org] [DOI] (I p)

Wan-Zhen Huang, Jyun-Jhih Wang, Hui-Ju Chen, Jung-Tze Chen, Gwo-Chyuan Shaw
The heat-inducible essential response regulator WalR positively regulates transcription of sigI, mreBH and lytE in Bacillus subtilis under heat stress.
Res Microbiol: 2013, 164(10);998-1008
[PubMed:24125693] [WorldCat.org] [DOI] (I p)

Victoria L Marlow, Michael Porter, Laura Hobley, Taryn B Kiley, Jason R Swedlow, Fordyce A Davidson, Nicola R Stanley-Wall
Phosphorylated DegU manipulates cell fate differentiation in the Bacillus subtilis biofilm.
J Bacteriol: 2014, 196(1);16-27
[PubMed:24123822] [WorldCat.org] [DOI] (I p)

Ralf Moeller, Marina Raguse, Günther Reitz, Ryuichi Okayasu, Zuofeng Li, Stuart Klein, Peter Setlow, Wayne L Nicholson
Resistance of Bacillus subtilis spore DNA to lethal ionizing radiation damage relies primarily on spore core components and DNA repair, with minor effects of oxygen radical detoxification.
Appl Environ Microbiol: 2014, 80(1);104-9
[PubMed:24123749] [WorldCat.org] [DOI] (I p)

Naama Tepper, Tomer Shlomi
An integrated computational approach for metabolic flux analysis coupled with inference of tandem-MS collisional fragments.
Bioinformatics: 2013, 29(23);3045-52
[PubMed:24123514] [WorldCat.org] [DOI] (I p)

Dhirendra K Simanshu, Yoshihiro Yamaguchi, Jung-Ho Park, Masayori Inouye, Dinshaw J Patel
Structural basis of mRNA recognition and cleavage by toxin MazF and its regulation by antitoxin MazE in Bacillus subtilis.
Mol Cell: 2013, 52(3);447-58
[PubMed:24120662] [WorldCat.org] [DOI] (I p)

Fernando H Ramírez-Guadiana, Rocío Del Carmen Barajas-Ornelas, Víctor M Ayala-García, Ronald E Yasbin, Eduardo Robleto, Mario Pedraza-Reyes
Transcriptional coupling of DNA repair in sporulating Bacillus subtilis cells.
Mol Microbiol: 2013, 90(5);1088-99
[PubMed:24118570] [WorldCat.org] [DOI] (I p)

Sunil V Sharma, Miriam Arbach, Alexandra A Roberts, Colin J Macdonald, Murree Groom, Chris J Hamilton
Biophysical features of bacillithiol, the glutathione surrogate of Bacillus subtilis and other firmicutes.
Chembiochem: 2013, 14(16);2160-8
[PubMed:24115506] [WorldCat.org] [DOI] (I p)

Susanne Pohl, Gaurav Bhavsar, Joanne Hulme, Alexandra E Bloor, Goksel Misirli, Matthew W Leckenby, David S Radford, Wendy Smith, Anil Wipat, E Diane Williamson, Colin R Harwood, Rocky M Cranenburgh
Proteomic analysis of Bacillus subtilis strains engineered for improved production of heterologous proteins.
Proteomics: 2013, 13(22);3298-308
[PubMed:24115457] [WorldCat.org] [DOI] (I p)

Kestutis Timinskas, Monika Balvočiūtė, Albertas Timinskas, Česlovas Venclovas
Comprehensive analysis of DNA polymerase III α subunits and their homologs in bacterial genomes.
Nucleic Acids Res: 2014, 42(3);1393-413
[PubMed:24106089] [WorldCat.org] [DOI] (I p)

In-Cheol Yeo, Nam Keun Lee, Byung Wook Yang, Young Tae Hahm
RNA-seq analysis of antibiotic-producing Bacillus subtilis SC-8 in response to signal peptide PapR of Bacillus cereus.
Appl Biochem Biotechnol: 2014, 172(2);580-94
[PubMed:24104687] [WorldCat.org] [DOI] (I p)

Tomokazu Ito, Jumpei Iimori, Sayuri Takayama, Akihito Moriyama, Ayako Yamauchi, Hisashi Hemmi, Tohru Yoshimura
Conserved pyridoxal protein that regulates Ile and Val metabolism.
J Bacteriol: 2013, 195(24);5439-49
[PubMed:24097949] [WorldCat.org] [DOI] (I p)

Katarina Surdova, Pamela Gamba, Dennis Claessen, Tjalling Siersma, Martijs J Jonker, Jeff Errington, Leendert W Hamoen
The conserved DNA-binding protein WhiA is involved in cell division in Bacillus subtilis.
J Bacteriol: 2013, 195(24);5450-60
[PubMed:24097947] [WorldCat.org] [DOI] (I p)

Sara A Leiman, Janine M May, Matthew D Lebar, Daniel Kahne, Roberto Kolter, Richard Losick
D-amino acids indirectly inhibit biofilm formation in Bacillus subtilis by interfering with protein synthesis.
J Bacteriol: 2013, 195(23);5391-5
[PubMed:24097941] [WorldCat.org] [DOI] (I p)

Vamsi K Moparthi, Brijesh Kumar, Yusra Al-Eryani, Eva Sperling, Kamil Górecki, Torbjörn Drakenberg, Cecilia Hägerhäll
Functional role of the MrpA- and MrpD-homologous protein subunits in enzyme complexes evolutionary related to respiratory chain complex I.
Biochim Biophys Acta: 2014, 1837(1);178-85
[PubMed:24095649] [WorldCat.org] [DOI] (P p)

Marta Carolina Afonso Lages, Katrin Beilharz, Danae Morales Angeles, Jan-Willem Veening, Dirk-Jan Scheffers
The localization of key Bacillus subtilis penicillin binding proteins during cell growth is determined by substrate availability.
Environ Microbiol: 2013, 15(12);3272-81
[PubMed:23895585] [WorldCat.org] [DOI] (I p)

Lynne S Cairns, Victoria L Marlow, Emma Bissett, Adam Ostrowski, Nicola R Stanley-Wall
A mechanical signal transmitted by the flagellum controls signalling in Bacillus subtilis.
Mol Microbiol: 2013, 90(1);6-21
[PubMed:23888912] [WorldCat.org] [DOI] (I p)

Patricia Domínguez-Cuevas, Ida Porcelli, Richard A Daniel, Jeff Errington
Differentiated roles for MreB-actin isologues and autolytic enzymes in Bacillus subtilis morphogenesis.
Mol Microbiol: 2013, 89(6);1084-98
[PubMed:23869552] [WorldCat.org] [DOI] (I p)

Zhong Fang, Alexandra A Roberts, Karissa Weidman, Sunil V Sharma, Al Claiborne, Christopher J Hamilton, Patricia C Dos Santos
Cross-functionalities of Bacillus deacetylases involved in bacillithiol biosynthesis and bacillithiol-S-conjugate detoxification pathways.
Biochem J: 2013, 454(2);239-47
[PubMed:23758290] [WorldCat.org] [DOI] (I p)

Vivianne J Goosens, Andreas Otto, Corinna Glasner, Carmine C Monteferrante, René van der Ploeg, Michael Hecker, Dörte Becher, Jan Maarten van Dijl
Novel twin-arginine translocation pathway-dependent phenotypes of Bacillus subtilis unveiled by quantitative proteomics.
J Proteome Res: 2013, 12(2);796-807
[PubMed:23256564] [WorldCat.org] [DOI] (I p)

Peter T McKenney, Adam Driks, Patrick Eichenberger
The Bacillus subtilis endospore: assembly and functions of the multilayered coat.
Nat Rev Microbiol: 2013, 11(1);33-44
[PubMed:23202530] [WorldCat.org] [DOI] (I p)

Letal I Salzberg, Leagh Powell, Karsten Hokamp, Eric Botella, David Noone, Kevin M Devine
The WalRK (YycFG) and σ(I) RsgI regulators cooperate to control CwlO and LytE expression in exponentially growing and stressed Bacillus subtilis cells.
Mol Microbiol: 2013, 87(1);180-95
[PubMed:23199363] [WorldCat.org] [DOI] (I p)

für SFB

Additional publications: PubMed

Screening

Additional publications: PubMed