Difference between revisions of "RasP"

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* '''Description:''' intramembrane protease, cleaves [[FtsL]] and [[RsiW]] as well as signal peptides after release  of the secreted proteins<br/><br/>
+
* '''Description:''' intramembrane protease, cleaves [[FtsL]], [[RsiV]] and [[RsiW]] as well as signal peptides after release  of the secreted proteins<br/><br/>
  
 
{| align="right" border="1" cellpadding="2"  
 
{| align="right" border="1" cellpadding="2"  
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|style="background:#ABCDEF;" align="center"| '''Product''' || intramembrane protease  
 
|style="background:#ABCDEF;" align="center"| '''Product''' || intramembrane protease  
 
|-
 
|-
|style="background:#ABCDEF;" align="center"|'''Function''' || control of [[cell division]] and [[SigW]] activity
+
|style="background:#ABCDEF;" align="center"|'''Function''' || control of [[cell division]], and [[SigV]] and [[SigW]] activity
 
|-
 
|-
 
|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU16560 rasP]
 
|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU16560 rasP]
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===Phenotypes of a mutant ===
 
===Phenotypes of a mutant ===
 
* defects in competence development, [[protein secretion]] and membrane protein production {{PubMed|23155385}}
 
* defects in competence development, [[protein secretion]] and membrane protein production {{PubMed|23155385}}
 +
* mutants grow slower in liquid, are not competent, can’t activate [[SigW]], have [[cell division]] defects, and decreased long term survival {{PubMed|23687273}}
 
=== Database entries ===
 
=== Database entries ===
  
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* '''Catalyzed reaction/ biological activity:'''  
 
* '''Catalyzed reaction/ biological activity:'''  
** cleaves [[FtsL]] and [[RsiW]]
+
** cleaves [[FtsL]], [[RsiV]] and [[RsiW]]
 
** cleaves signal peptides after release  of the secreted proteins {{PubMed|21810987}}
 
** cleaves signal peptides after release  of the secreted proteins {{PubMed|21810987}}
  
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* '''[[SubtInteract|Interactions]]:'''
 
* '''[[SubtInteract|Interactions]]:'''
** [[RasP]]-[[FtsL]][[RasP]]-[[RsiW]]
+
** [[RasP]]-[[FtsL]]
 +
** [[RasP]]-[[RsiW]]
 +
** [[RasP]]-[[RsiV]] {{PubMed|23687273}}
  
 
* '''[[Localization]]:''' cell membrane [http://www.ncbi.nlm.nih.gov/pubmed/18763711 PubMed]
 
* '''[[Localization]]:''' cell membrane [http://www.ncbi.nlm.nih.gov/pubmed/18763711 PubMed]
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=References=
 
=References=
 
==Reviews==
 
==Reviews==
'''Additional reviews:''' {{PubMed|23479438,22381678}}
+
<pubmed> 20836086 23479438,22381678</pubmed>
<pubmed> 20836086 </pubmed>
 
 
==Original Publications==
 
==Original Publications==
'''Additional original publications:''' {{PubMed|23155385}}
+
<pubmed>16899079,15130127,18599827,17020588,19889088 ,18763711, 20644139 21810987 23687273 23155385</pubmed>
<pubmed>16899079,15130127,18599827,17020588,19889088 ,18763711, 20644139 21810987 </pubmed>
 
  
 
[[Category:Protein-coding genes]]
 
[[Category:Protein-coding genes]]

Revision as of 16:38, 27 May 2013

  • Description: intramembrane protease, cleaves FtsL, RsiV and RsiW as well as signal peptides after release of the secreted proteins

Gene name rasP
Synonyms yluC
Essential no
Product intramembrane protease
Function control of cell division, and SigV and SigW activity
Gene expression levels in SubtiExpress: rasP
Interactions involving this protein in SubtInteract: RasP
MW, pI 46 kDa, 5.14
Gene length, protein length 1266 bp, 422 aa
Immediate neighbours ispC, proS
Sequences Protein DNA DNA_with_flanks
Genetic context
YluC context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
RasP expression.png















Categories containing this gene/protein

cell division, proteolysis, sigma factors and their control, membrane proteins

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU16560

Phenotypes of a mutant

  • defects in competence development, protein secretion and membrane protein production PubMed
  • mutants grow slower in liquid, are not competent, can’t activate SigW, have cell division defects, and decreased long term survival PubMed

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
    • cleaves FtsL, RsiV and RsiW
    • cleaves signal peptides after release of the secreted proteins PubMed
  • Protein family: peptidase M50B family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Thomas Wiegert, University of Bayreuth, Germany Homepage

Your additional remarks

References

Reviews

Original Publications

Jessica L Hastie, Kyle B Williams, Craig D Ellermeier
The activity of σV, an extracytoplasmic function σ factor of Bacillus subtilis, is controlled by regulated proteolysis of the anti-σ factor RsiV.
J Bacteriol: 2013, 195(14);3135-44
[PubMed:23687273] [WorldCat.org] [DOI] (I p)

Jessica C Zweers, Pierre Nicolas, Thomas Wiegert, Jan Maarten van Dijl, Emma L Denham
Definition of the σ(W) regulon of Bacillus subtilis in the absence of stress.
PLoS One: 2012, 7(11);e48471
[PubMed:23155385] [WorldCat.org] [DOI] (I p)

Akira Saito, Yohei Hizukuri, Ei-ichi Matsuo, Shinobu Chiba, Hiroyuki Mori, Osamu Nishimura, Koreaki Ito, Yoshinori Akiyama
Post-liberation cleavage of signal peptides is catalyzed by the site-2 protease (S2P) in bacteria.
Proc Natl Acad Sci U S A: 2011, 108(33);13740-5
[PubMed:21810987] [WorldCat.org] [DOI] (I p)

Inga Wadenpohl, Marc Bramkamp
DivIC stabilizes FtsL against RasP cleavage.
J Bacteriol: 2010, 192(19);5260-3
[PubMed:20644139] [WorldCat.org] [DOI] (I p)

Janine Heinrich, Kerstin Hein, Thomas Wiegert
Two proteolytic modules are involved in regulated intramembrane proteolysis of Bacillus subtilis RsiW.
Mol Microbiol: 2009, 74(6);1412-26
[PubMed:19889088] [WorldCat.org] [DOI] (I p)

Hannes Hahne, Susanne Wolff, Michael Hecker, Dörte Becher
From complementarity to comprehensiveness--targeting the membrane proteome of growing Bacillus subtilis by divergent approaches.
Proteomics: 2008, 8(19);4123-36
[PubMed:18763711] [WorldCat.org] [DOI] (I p)

Janine Heinrich, Tuula Lundén, Vesa P Kontinen, Thomas Wiegert
The Bacillus subtilis ABC transporter EcsAB influences intramembrane proteolysis through RasP.
Microbiology (Reading): 2008, 154(Pt 7);1989-1997
[PubMed:18599827] [WorldCat.org] [DOI] (P p)

Marc Bramkamp, Louise Weston, Richard A Daniel, Jeff Errington
Regulated intramembrane proteolysis of FtsL protein and the control of cell division in Bacillus subtilis.
Mol Microbiol: 2006, 62(2);580-91
[PubMed:17020588] [WorldCat.org] [DOI] (P p)

Stephan Zellmeier, Wolfgang Schumann, Thomas Wiegert
Involvement of Clp protease activity in modulating the Bacillus subtilissigmaw stress response.
Mol Microbiol: 2006, 61(6);1569-82
[PubMed:16899079] [WorldCat.org] [DOI] (P p)

Susanne Schöbel, Stephan Zellmeier, Wolfgang Schumann, Thomas Wiegert
The Bacillus subtilis sigmaW anti-sigma factor RsiW is degraded by intramembrane proteolysis through YluC.
Mol Microbiol: 2004, 52(4);1091-105
[PubMed:15130127] [WorldCat.org] [DOI] (P p)