Difference between revisions of "DnaI"

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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ytxB]]'', ''[[dnaB]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ytxB]]'', ''[[dnaB]]''
 
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU28980 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU28980 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU28980 Advanced_DNA]
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU28980 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU28980 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU28980 DNA_with_flanks]
 
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|-
 
|colspan="2" | '''Genetic context''' <br/> [[Image:dnaI_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:dnaI_context.gif]]

Revision as of 11:58, 14 May 2013

  • Description: primosome component (helicase loader), part of the replisome

Gene name dnaI
Synonyms ytxA, dnaY
Essential yes PubMed
Product primosome component (helicase loader)
Function DNA replication
Gene expression levels in SubtiExpress: dnaI
Interactions involving this protein in SubtInteract: DnaI
MW, pI 35 kDa, 5.743
Gene length, protein length 933 bp, 311 aa
Immediate neighbours ytxB, dnaB
Sequences Protein DNA DNA_with_flanks
Genetic context
DnaI context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
DnaI expression.png
























Categories containing this gene/protein

DNA replication, essential genes

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU28980

Phenotypes of a mutant

essential PubMed

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure: 2K7R (N-terminal domain)
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Reviews

Geoffrey S Briggs, Wiep Klaas Smits, Panos Soultanas
Chromosomal replication initiation machinery of low-G+C-content Firmicutes.
J Bacteriol: 2012, 194(19);5162-70
[PubMed:22797751] [WorldCat.org] [DOI] (I p)

Original publications