Difference between revisions of "YoaB"

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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yoaA]]'', ''[[yoaC]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yoaA]]'', ''[[yoaC]]''
 
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU18540 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU18540 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU18540 Advanced_DNA]
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU18540 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU18540 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU18540 DNA_with_flanks]
 
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|colspan="2" | '''Genetic context''' <br/> [[Image:yoaB_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:yoaB_context.gif]]

Revision as of 10:23, 14 May 2013

  • Description: 2-oxoglutarate permease (proton symporter)

Gene name yoaB
Synonyms
Essential no
Product 2-oxoglutarate permease (proton symporter)
Function uptake of alpha-ketoglutarate
Gene expression levels in SubtiExpress: yoaB
Metabolic function and regulation of this protein in SubtiPathways:
Central C-metabolism
MW, pI 45 kDa, 9.413
Gene length, protein length 1242 bp, 414 aa
Immediate neighbours yoaA, yoaC
Sequences Protein DNA DNA_with_flanks
Genetic context
YoaB context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YoaB expression.png















Categories containing this gene/protein

transporters/ other, utilization of specific carbon sources, membrane proteins

This gene is a member of the following regulons

S-box

The gene

Basic information

  • Locus tag: BSU18540

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: acetyltransferase family (according to Swiss-Prot)
  • Paralogous protein(s): CsbX

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
  • Regulatory mechanism: S-box: transcription termination/ antitermination, the S-box riboswitch binds S-adenosylmethionine resulting in termination PubMed
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References