Difference between revisions of "PpsD"

From SubtiWiki
Jump to: navigation, search
Line 22: Line 22:
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ppsE]]'', ''[[ppsC]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ppsE]]'', ''[[ppsC]]''
 
|-
 
|-
|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU18310 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU18310 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU18310 Advanced_DNA]
+
|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU18310 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU18310 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU18310 DNA_with_flanks]
 
|-
 
|-
 
|-
 
|-

Revision as of 10:22, 14 May 2013

  • Description: plipastatin synthetase

Gene name ppsD
Synonyms
Essential no
Product plipastatin synthetase
Function production of the antibacterial compound plipastatin
Gene expression levels in SubtiExpress: ppsD
MW, pI 406 kDa, 5.347
Gene length, protein length 10809 bp, 3603 aa
Immediate neighbours ppsE, ppsC
Sequences Protein DNA DNA_with_flanks
Genetic context
PpsD context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
PpsD expression.png
























Categories containing this gene/protein

miscellaneous metabolic pathways, biosynthesis of antibacterial compounds

This gene is a member of the following regulons

AbrB regulon

The gene

Basic information

  • Locus tag: BSU18310

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: ATP-dependent AMP-binding enzyme family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Additional publications: PubMed