Difference between revisions of "SpoIISA"
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[spoIISB]]'', ''[[pit]]'' | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[spoIISB]]'', ''[[pit]]'' | ||
|- | |- | ||
− | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU12830 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU12830 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU12830 | + | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU12830 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU12830 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU12830 DNA_with_flanks] |
|- | |- | ||
|colspan="2" | '''Genetic context''' <br/> [[Image:spoIISA_context.gif]] | |colspan="2" | '''Genetic context''' <br/> [[Image:spoIISA_context.gif]] |
Revision as of 09:59, 14 May 2013
- Description: lethal when synthesized during vegetative growth in the absence of SpoIISB
Gene name | spoIISA |
Synonyms | ykaC |
Essential | no |
Product | toxin |
Function | programmed cell death |
Gene expression levels in SubtiExpress: spoIISA | |
Interactions involving this protein in SubtInteract: SpoIISA | |
MW, pI | 28 kDa, 4.683 |
Gene length, protein length | 744 bp, 248 aa |
Immediate neighbours | spoIISB, pit |
Sequences | Protein DNA DNA_with_flanks |
Genetic context This image was kindly provided by SubtiList
| |
Expression at a glance PubMed |
Contents
Categories containing this gene/protein
sporulation proteins, toxins, antitoxins and immunity against toxins, membrane proteins
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU12830
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains: three putative membrane-spanning segments and a cytoplasmic domain
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Localization:
- cell membrane PubMed
Database entries
- UniProt: O34853
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Sigma factor:
- Regulation:
- levels increase at the point of entry into stationary phase of cell cultures grown in sporulation-inducing medium, this is independent of Spo0A PubMed
- Regulatory mechanism:
- Additional information:
Biological materials
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Additional Publications: PubMed