Difference between revisions of "CitT"

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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[citS]]'', ''[[yflP]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[citS]]'', ''[[yflP]]''
 
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU07590 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU07590 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU07590 Advanced_DNA]
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU07590 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU07590 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU07590 DNA_with_flanks]
 
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|colspan="2" | '''Genetic context''' <br/> [[Image:citT_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:citT_context.gif]]

Revision as of 09:42, 14 May 2013

  • Description: two-component response regulator, regulation of citrate uptake

Gene name citT
Synonyms yflQ
Essential no
Product two-component response regulator
Function regulation of citrate uptake
Gene expression levels in SubtiExpress: citT
Interactions involving this protein in SubtInteract: CitT
Metabolic function and regulation of this protein in SubtiPathways:
Central C-metabolism
MW, pI 25 kDa, 6.362
Gene length, protein length 678 bp, 226 aa
Immediate neighbours citS, yflP
Sequences Protein DNA DNA_with_flanks
Genetic context
CitT context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
CitT expression.png




























Categories containing this gene/protein

utilization of specific carbon sources, transcription factors and their control, phosphoproteins

This gene is a member of the following regulons

The CitT regulon:

The gene

Basic information

  • Locus tag: BSU07590

Phenotypes of a mutant

no growth with citrate as sole carbon source PubMed

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: binding to the promoter of the citM-yflN operon and activation of transcription in the presence of citrate PubMed
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification: phosphorylated by CitS on an Asp residue
  • Cofactor(s):
  • Effectors of protein activity: phosphorylation likely affects DNA-binding activity

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References