Difference between revisions of "RpmB"

From SubtiWiki
Jump to: navigation, search
Line 8: Line 8:
 
|style="background:#ABCDEF;" align="center"| '''Synonyms''' || ''yloT ''
 
|style="background:#ABCDEF;" align="center"| '''Synonyms''' || ''yloT ''
 
|-
 
|-
|style="background:#ABCDEF;" align="center"| '''Essential''' || yes [http://www.ncbi.nlm.nih.gov/pubmed/12682299 PubMed]
+
|style="background:#ABCDEF;" align="center"| '''Essential''' || no {{PubMed|23002217}}
 
|-
 
|-
 
|style="background:#ABCDEF;" align="center"| '''Product''' || [[ribosomal protein]] L28
 
|style="background:#ABCDEF;" align="center"| '''Product''' || [[ribosomal protein]] L28
Line 37: Line 37:
 
<br/><br/><br/><br/>
 
<br/><br/><br/><br/>
 
<br/><br/><br/><br/>
 
<br/><br/><br/><br/>
<br/><br/><br/><br/>
 
<br/><br/><br/><br/>
 
 
 
 
<br/><br/>
 
<br/><br/>
  
 
= [[Categories]] containing this gene/protein =
 
= [[Categories]] containing this gene/protein =
{{SubtiWiki category|[[translation]]}},
+
{{SubtiWiki category|[[translation]]}}
{{SubtiWiki category|[[essential genes]]}}
 
  
 
= This gene is a member of the following [[regulons]] =
 
= This gene is a member of the following [[regulons]] =
Line 57: Line 52:
  
 
===Phenotypes of a mutant ===
 
===Phenotypes of a mutant ===
 
essential [http://www.ncbi.nlm.nih.gov/pubmed/12682299 PubMed]
 
  
 
=== Database entries ===
 
=== Database entries ===
Line 143: Line 136:
  
 
=References=
 
=References=
 +
'''Additional publications:''' {{PubMed|23002217}}
 
<pubmed>19653700 </pubmed>
 
<pubmed>19653700 </pubmed>
 
[[Category:Protein-coding genes]]
 
[[Category:Protein-coding genes]]

Revision as of 11:51, 26 September 2012

Gene name rpmB
Synonyms yloT
Essential no PubMed
Product ribosomal protein L28
Function translation
Gene expression levels in SubtiExpress: rpmB
Interactions involving this protein in SubtInteract: RpmB
MW, pI 6 kDa, 12.242
Gene length, protein length 186 bp, 62 aa
Immediate neighbours spoVM, yloU
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
RpmB context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
RpmB expression.png















Categories containing this gene/protein

translation

This gene is a member of the following regulons

stringent response

The gene

Basic information

  • Locus tag: BSU15820

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Sigma factor:
  • Regulation:
    • RelA dependent downregulation (Class I) during stringent response PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Additional publications: PubMed