Difference between revisions of "YwcC"

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|style="background:#ABCDEF;" align="center"|'''Function''' || control of [[SlrA]] expression
 
|style="background:#ABCDEF;" align="center"|'''Function''' || control of [[SlrA]] expression
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://cellpublisher.gobics.de/subtiexpress/ ''Subti''Express]''': [http://cellpublisher.gobics.de/subtiexpress/bsu/BSU38220 ywcC]
 
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Regulation of this protein in [[SubtiPathways|''Subti''Pathways]]: <br/>[http://subtiwiki.uni-goettingen.de/pathways/biofilm.html Biofilm]'''
 
|colspan="2" style="background:#FAF8CC;" align="center"| '''Regulation of this protein in [[SubtiPathways|''Subti''Pathways]]: <br/>[http://subtiwiki.uni-goettingen.de/pathways/biofilm.html Biofilm]'''

Revision as of 17:14, 7 August 2012

  • Description: transcription repressor (TetR family), controls slrA expression

Gene name ywcC
Synonyms ipa-33d
Essential no
Product transcription repressor (TetR family)
Function control of SlrA expression
Gene expression levels in SubtiExpress: ywcC
Regulation of this protein in SubtiPathways:
Biofilm
MW, pI 25 kDa, 8.466
Gene length, protein length 669 bp, 223 aa
Immediate neighbours gtaC, slrA
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YwcC context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YwcC expression.png




























Categories containing this gene/protein

transcription factors and their control, biofilm formation

This gene is a member of the following regulons

The YwcC regulon:

The gene

Basic information

  • Locus tag: BSU38220

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References