Difference between revisions of "YrvJ"
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* '''Kinetic information:''' | * '''Kinetic information:''' | ||
| − | * '''Domains:''' | + | * '''Domains:''' contains an amidase_3 domain (like [[CwlC]], [[CwlD]], [[LytC]], [[YqiI]]) |
* '''Modification:''' | * '''Modification:''' | ||
Revision as of 15:16, 17 June 2012
- Description: similar to N-acetylmuramoyl-L-alanine amidase
| Gene name | yrvJ |
| Synonyms | |
| Essential | no |
| Product | peptidoglycan hydrolase |
| Function | cell wall metabolism |
| MW, pI | 55 kDa, 5.192 |
| Gene length, protein length | 1554 bp, 518 aa |
| Immediate neighbours | yrzK, yrvI |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
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Expression at a glance PubMed
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Contents
Categories containing this gene/protein
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU27580
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: Hydrolyzes the link between N-acetylmuramoyl residues and L-amino acid residues in certain cell-wall glycopeptides (according to Swiss-Prot)
- Protein family: N-acetylmuramoyl-L-alanine amidase 3 family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization:
Database entries
- Structure:
- UniProt: O32041
- KEGG entry: [3]
- E.C. number: 3.5.1.28
Additional information
Expression and regulation
- Operon: yrvJ PubMed
- Sigma factor:
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
