Difference between revisions of "OpuCD"

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|colspan="2" |'''[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=opuCD_3467546_3468235_-1 Expression at a glance]'''&#160;&#160;&#160;{{PubMed|22383849}}<br/>[[Image:opuCD_expression.png|500px]]
 
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Revision as of 09:19, 23 April 2012

Gene name opuCD
Synonyms yvbB
Essential no
Product glycine betaine/carnitine/choline ABC transporter
Function compatible solute transport
Interactions involving this protein in SubtInteract: OpuCD
Metabolic function and regulation of this protein in SubtiPathways:
Stress
MW, pI 24 kDa, 10.149
Gene length, protein length 687 bp, 229 aa
Immediate neighbours sdpR, opuCC
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
OpuCD context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
OpuCD expression.png




























Categories containing this gene/protein

ABC transporters, coping with hyper-osmotic stress, membrane proteins

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU33800

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: CysTW subfamily (according to Swiss-Prot)
  • Paralogous protein(s): OpuBD

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Sigma factor:
  • Regulation:
    • induced by salt stress PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References