Difference between revisions of "SpoIIQ"
(→Extended information on the protein) |
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| Line 82: | Line 82: | ||
* '''[[SubtInteract|Interactions]]:''' | * '''[[SubtInteract|Interactions]]:''' | ||
| − | ** [[SpoIIIAH]]-[[SpoIIQ]] {{PubMed|15574594,21097616}} | + | ** [[SpoIIIAH]](12)-[[SpoIIQ]](12) (interaction between proteins membrane proteins expressed in the mother cell and the forespore, respectively; the complex forms a 60 Å channel made up of twelve subunits of each protein) {{PubMed|22431604,22431613,15574594,21097616}} |
** [[SpoIIQ]]-[[SpoIIE]] | ** [[SpoIIQ]]-[[SpoIIE]] | ||
| − | * '''[[Localization]]:''' forespore membrane (according to Swiss-Prot) | + | * '''[[Localization]]:''' |
| + | ** forespore membrane (according to Swiss-Prot) | ||
=== Database entries === | === Database entries === | ||
* '''Structure:''' | * '''Structure:''' | ||
| + | ** [http://www.rcsb.org/pdb/explore/explore.do?structureId=3UZ0 3UZO]; [http://www.rcsb.org/pdb/explore/explore.do?structureId=3TUF 3TUF] (the [[SpoIIQ]]-[[SpoIIIAH]] pore forming complex) {{PubMed|22431604,22431613}} | ||
* '''UniProt:''' [http://www.uniprot.org/uniprot/P71044 P71044] | * '''UniProt:''' [http://www.uniprot.org/uniprot/P71044 P71044] | ||
| Line 131: | Line 133: | ||
=References= | =References= | ||
| − | + | '''Additional publications:''' {{PubMed|22431604}} | |
| − | <pubmed>18812514,15752199,18077456,18485064,15574594,15044948,15882622,19609349 ,9140963 20444098 17121846 18160039 21097616 16497325,15699190</pubmed> | + | <pubmed>18812514,15752199,18077456,18485064,15574594,15044948,15882622,19609349 ,9140963 20444098 17121846 18160039 21097616 16497325,15699190 22431613</pubmed> |
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] | ||
Revision as of 15:48, 25 March 2012
- Description: component of the SpoIIIAH-SpoIIQ type III secretion system residing in the forespore membrane, required for anchoring of proteins on both sides of the sporulation septum
| Gene name | spoIIQ |
| Synonyms | ywnI |
| Essential | no |
| Product | component of a type III secretion system |
| Function | forespore engulfment |
| Interactions involving this protein in SubtInteract: SpoIIQ | |
| MW, pI | 30 kDa, 4.475 |
| Gene length, protein length | 849 bp, 283 aa |
| Immediate neighbours | ywnJ, ywnH |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context
This image was kindly provided by SubtiList
| |
Contents
Categories containing this gene/protein
sporulation proteins, membrane proteins
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU36550
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Localization:
- forespore membrane (according to Swiss-Prot)
Database entries
- UniProt: P71044
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Operon: spoIIQ PubMed
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Additional publications: PubMed
