Difference between revisions of "Rpe"
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=== Additional information=== | === Additional information=== | ||
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=The protein= | =The protein= | ||
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=== Database entries === | === Database entries === | ||
| − | * '''Structure:''' [http://www.rcsb.org/pdb/cgi/explore.cgi?pdbId=1tqj 1TQJ] (from ''Synechocystis sp.'', 61% identity, 75% similarity) {{PubMed|15333955}} | + | * '''Structure:''' [http://www.rcsb.org/pdb/cgi/explore.cgi?pdbId=1tqj 1TQJ] (from ''Synechocystis sp.'', 61% identity, 75% similarity) {{PubMed|15333955}} |
* '''UniProt:''' [http://www.uniprot.org/uniprot/O34557 O34557] | * '''UniProt:''' [http://www.uniprot.org/uniprot/O34557 O34557] | ||
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=References= | =References= | ||
| − | + | <pubmed> 15333955</pubmed> | |
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] | ||
Revision as of 15:38, 16 April 2011
- Description: ribulose 5-phosphate 3-epimerase
| Gene name | rpe |
| Synonyms | yloR |
| Essential | no |
| Product | ribulose 5-phosphate 3-epimerase |
| Function | pentose phosphate pathway |
| Metabolic function and regulation of this protein in SubtiPathways: Central C-metabolism | |
| MW, pI | 23 kDa, 5.651 |
| Gene length, protein length | 651 bp, 217 aa |
| Immediate neighbours | cpgA, yloS |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
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Contents
Categories containing this gene/protein
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU15790
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: D-ribulose 5-phosphate = D-xylulose 5-phosphate (according to Swiss-Prot)
- Protein family: ribulose-phosphate 3-epimerase family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization:
Database entries
- UniProt: O34557
- KEGG entry: [2]
- E.C. number: 5.1.3.1
Additional information
Expression and regulation
- Operon:
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Eric L Wise, Julie Akana, John A Gerlt, Ivan Rayment
Structure of D-ribulose 5-phosphate 3-epimerase from Synechocystis to 1.6 A resolution.
Acta Crystallogr D Biol Crystallogr: 2004, 60(Pt 9);1687-90
[PubMed:15333955]
[WorldCat.org]
[DOI]
(P p)
