|
|
Line 1: |
Line 1: |
− | <big>Welcome to '''''Subti''Wiki'''! </big> - ''Bacillus subtilis'' annotation the "wiki" way!<br/>
| + | ==== ==== |
− | [[File:Start_page_small.png|right|link=http://www.subtiwiki.uni-goettingen.de/]]
| |
− | [[File:Playground_small.png|right|link=http://www.subtiwiki.uni-goettingen.de/wiki/index.php/Playground]]
| |
− | [[File:Wish_List_small.png|right|link=http://www.subtiwiki.uni-goettingen.de/wiki/index.php/Wish_List]]
| |
− | <br/>
| |
− | <big>'''Contact:'''</big> [http://wwwuser.gwdg.de/~genmibio/stuelke.html General Microbiology, University of Göttingen], [mailto:jstuelk@gwdg.de send mail]
| |
| | | |
− | <br/> | + | <small> 1f5a64cc87 </small> |
− | <big>'''Upcoming events:'''</big>
| + | <small></small> |
− | * '''March 14 - 16, 2011:''' The European [[BACELL meeting]] will take place in Göttingen, Germany. [mailto:jstuelk@gwdg.de contact], [[BACELL meeting|website]]
| + | <small></small> |
− | * '''June 2011:''' The 16th International Conference on Bacilli (aka 6th International Conference on Gram-positive Microorganisms) will take place in lovely Tuscany, Italy. [http://www.grampositiveconference.org/index.html Conference website]
| + | <small></small> |
− | <br/>
| + | <small></small> |
− | <big>'''News in ''Subti''Wiki:'''</big>
| |
− | * '''December 2010:''' the beta version of an interactive protein-protein interaction map is available [http://cellpublisher.gobics.de/subtinteract/interactionList/PtsH here] (just replace "PtsH" in the browser line by the protein of your interest)
| |
− | * '''December 2010:''' [http://cellpublisher.gobics.de/scp.html SubtiCellPublisher] allows the conversion of CellDesigner diagrams to navigatable presentations in the style of [[SubtiPathways]]
| |
− | * '''December 2010:''' all genes are linked to [[regulons]], and the pages of the [[regulons]] provide an overview on all genes that are members of this specific regulon.
| |
− | * '''December 2010:''' all genes/proteins are linked to [[categories]], and the pages of the [[categories]] provide an overview on all genes/proteins that are members of this specific category.
| |
− | * '''November 2010:''' a beta version of [http://subtiwiki.uni-goettingen.de/pathways/SubtInteract/demo_mitlinks/ SubtInteract] is online
| |
− | * '''August 2010:''' several new pathway maps including [http://subtiwiki.uni-goettingen.de/pathways/other_nitrogen_sources/index.html Utilization of other nitrogen sources], [http://subtiwiki.uni-goettingen.de/pathways/biotin/index.html Biotin synthesis], [http://subtiwiki.uni-goettingen.de/pathways/murein/index.html Murein recycling], and [http://subtiwiki.uni-goettingen.de/pathways/secretion/index.html Protein secretion] were uploaded to [[SubtiPathways]]
| |
− | * '''July 2010:''' A manually curated functional classification of ''Bacillus'' genes can be downloaded [http://www.subtiwiki.uni-goettingen.de/otherFiles/classification.zip here].
| |
− | * '''March 2010:''' novel [[plasmids]] for the creation of strains expressing proteins with a C-terminal triple FLAG-tag (for simple immunological analysis of the proteins, [[pGP1087]] and [[pGP1331]])
| |
− | | |
− | <br/> | |
− | {| border="0" cellpadding="1"
| |
− | |width="300"|<big>'''Genes''' (examples)</big>
| |
− | |width="300"|<big>'''Additional pages'''</big>
| |
− | |- style="height:20px"
| |
− | | ''[[spo0A]]'' || '''[http://subtipathways.uni-goettingen.de ''Subti''Pathways]'''
| |
− | |-
| |
− | | ''[[glnA]]'' || '''[[Lists of genes, proteins and RNAs]]'''
| |
− | |-
| |
− | | ''[[rny]]'' || '''[[Categories]]'''
| |
− | |-
| |
− | | ''[[psdA]]'' || '''[[Regulons]]'''
| |
− | |-
| |
− | | ''[[pckA]]'' || '''[[methods]]'''
| |
− | |-
| |
− | | ''[[dnaA]]'' || '''[[metabolism]]'''
| |
− | |-
| |
− | | ''[[rnpA]]'' || '''[[protein-protein interactions]]'''
| |
− | |-
| |
− | | ''[[sigB]]'' || '''[[genome-wide analyses]]'''
| |
− | |-
| |
− | | ''[[ptkA]]'' || '''[[list of plasmids]]'''
| |
− | |-
| |
− | | ''[[mreC]]'' || '''[[labs working on Bacillus|labs working on ''Bacillus'']]'''
| |
− | |-
| |
− | | ''[[ccpA]]'' || '''[[the people behind SubtiWiki|the people behind ''Subti''Wiki]]'''
| |
− | |-
| |
− | | ''[[sr1]]'' || '''[[templates]]'''
| |
− | |-
| |
− | | || '''[http://www.subtiwiki.uni-goettingen.de/otherFiles/classification.zip Classification of genes]'''
| |
− | |}
| |
− | <br>
| |
− | <big>'''Publications describing ''Subti''Wiki and ''Subti''Pathways:'''</big> | |
− | <div style="width:73%"><pubmed> 20157485 19959575 </pubmed></div> | |
− | <br><br><br><br><br><br>
| |