Difference between revisions of "YugJ"

From SubtiWiki
Jump to: navigation, search
Line 52: Line 52:
  
 
=== Additional information===
 
=== Additional information===
 
 
  
  
Line 64: Line 62:
 
* '''Protein family:''' iron-containing alcohol dehydrogenase family (according to Swiss-Prot)
 
* '''Protein family:''' iron-containing alcohol dehydrogenase family (according to Swiss-Prot)
  
* '''Paralogous protein(s):'''
+
* '''Paralogous protein(s):''' [[YugK]]
  
 
=== Extended information on the protein ===
 
=== Extended information on the protein ===
Line 125: Line 123:
  
 
=References=
 
=References=
 +
==Reviews==
 +
<pubmed> 20924577 </pubmed>
 +
==Original publications==
 
<pubmed> 9274030 </pubmed>  
 
<pubmed> 9274030 </pubmed>  
 +
==The corresponding protein in ''E. coli''==
 +
<pubmed> 20543070 18211903  </pubmed>
 
[[Category:Protein-coding genes]]
 
[[Category:Protein-coding genes]]

Revision as of 10:42, 12 May 2011

  • Description: similar to NADH-dependent butanol dehydrogenase

Gene name yugJ
Synonyms
Essential no
Product unknown
Function unknown
MW, pI 42 kDa, 5.221
Gene length, protein length 1161 bp, 387 aa
Immediate neighbours yugK, yuzA
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YugJ context.gif
This image was kindly provided by SubtiList



Categories containing this gene/protein

poorly characterized/ putative enzymes

This gene is a member of the following regulons

Spx regulon

The gene

Basic information

  • Locus tag: BSU31370

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: iron-containing alcohol dehydrogenase family (according to Swiss-Prot)
  • Paralogous protein(s): YugK

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Reviews

Laura R Jarboe
YqhD: a broad-substrate range aldehyde reductase with various applications in production of biorenewable fuels and chemicals.
Appl Microbiol Biotechnol: 2011, 89(2);249-57
[PubMed:20924577] [WorldCat.org] [DOI] (I p)

Original publications

Bauke Oudega, Gregory Koningstein, Luísa Rodrigues, Maria de Sales Ramon, Helmut Hilbert, Andreas Düsterhöft, Thomas M Pohl, Thomas Weitzenegger
Analysis of the Bacillus subtilis genome: cloning and nucleotide sequence of a 62 kb region between 275 degrees (rrnB) and 284 degrees (pai).
Microbiology (Reading): 1997, 143 ( Pt 8);2769-2774
[PubMed:9274030] [WorldCat.org] [DOI] (P p)

The corresponding protein in E. coli