Difference between revisions of "XylR"
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| + | = [[Categories]] containing this gene/protein = | ||
| + | {{SubtiWiki category|[[utilization of specific carbon sources]]}}, | ||
| + | {{SubtiWiki category|[[transcription factors and their control]]}} | ||
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| + | = This gene is a member of the following [[regulons]] = | ||
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=The gene= | =The gene= | ||
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=The protein= | =The protein= | ||
Revision as of 20:00, 8 December 2010
| Gene name | xylR |
| Synonyms | |
| Essential | no |
| Product | transcriptional repressor |
| Function | regulation of xylan and xylose utilization |
| Metabolic function and regulation of this protein in SubtiPathways: Sugar catabolism | |
| MW, pI | 38 kDa, 5.819 |
| Gene length, protein length | 1050 bp, 350 aa |
| Immediate neighbours | xynB, xylA |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
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Contents
Categories containing this gene/protein
utilization of specific carbon sources, transcription factors and their control
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU17590
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: transcription repression of the xylA-xylB and the xynP-xynB operons
- Protein family: ROK (nagC/xylR) family (according to Swiss-Prot)
- Paralogous protein(s): GlcK
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity: inducer: xylose
- Interactions:
- Localization:
Database entries
- Structure:
- UniProt: P94490
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Operon: xylR (according to DBTBS)
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant: GP270 (erm), available in the Stülke lab
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Wolfgang Hillen, Erlangen University, Germany Homepage
Your additional remarks
References
