Difference between revisions of "YidC2"

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(Expression and regulation)
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=Expression and regulation=
 
=Expression and regulation=
  
* '''Operon:'''  
+
* '''Operon:''' ''yqjG'' (according to [http://dbtbs.hgc.jp/COG/prom/yqjG.html DBTBS])
  
 
* '''[[Sigma factor]]:'''  
 
* '''[[Sigma factor]]:'''  
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** [[MifM]]: "attenuation mechanism", an mRNA hairpin of the ''yqjG'' transcript unfold upon translation arrest of [[MifM]] at decreased [[SpoIIIJ]] levels {{PubMed|19779460}}
 
** [[MifM]]: "attenuation mechanism", an mRNA hairpin of the ''yqjG'' transcript unfold upon translation arrest of [[MifM]] at decreased [[SpoIIIJ]] levels {{PubMed|19779460}}
  
* '''Additional information:'''  
+
* '''Additional information:'''
  
 
=Biological materials =
 
=Biological materials =

Revision as of 20:44, 18 November 2009

  • Description: Sec-independent membrane protein translocase

Gene name yqjG
Synonyms
Essential no
Product Sec-independent membrane protein translocase
Function membrane insertion of proteins and protein secretion
MW, pI 30 kDa, 9.903
Gene length, protein length 825 bp, 275 aa
Immediate neighbours mifM, yqjF
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YqjG context.gif
This image was kindly provided by SubtiList



The gene

Basic information

  • Locus tag: BSU23890

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: Type 2 subfamily (according to Swiss-Prot)
  • Paralogous protein(s): SpoIIIJ, one of the two proteins has to be present for viability PubMed

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization: membrane (according to Swiss-Prot)

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Operon: yqjG (according to DBTBS)
  • Regulatory mechanism:
    • MifM: "attenuation mechanism", an mRNA hairpin of the yqjG transcript unfold upon translation arrest of MifM at decreased SpoIIIJ levels PubMed
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References