Difference between revisions of "GidA"
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| − | * '''Description:''' glucose-inhibited division protein, | + | * '''Description:''' glucose-inhibited division protein, tRNA uridine 5-carboxymethylaminomethyl modification enzyme<br/><br/> |
{| align="right" border="1" cellpadding="2" | {| align="right" border="1" cellpadding="2" | ||
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|style="background:#ABCDEF;" align="center"| '''Essential''' || no | |style="background:#ABCDEF;" align="center"| '''Essential''' || no | ||
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| − | |style="background:#ABCDEF;" align="center"| '''Product''' || | + | |style="background:#ABCDEF;" align="center"| '''Product''' || tRNA uridine 5-carboxymethylaminomethyl modification enzyme |
|- | |- | ||
|style="background:#ABCDEF;" align="center"|'''Function''' || tRNA modification | |style="background:#ABCDEF;" align="center"|'''Function''' || tRNA modification | ||
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=== Database entries === | === Database entries === | ||
| − | * '''Structure:''' | + | * '''Structure:''' [http://www.rcsb.org/pdb/cgi/explore.cgi?pdbId=3G05 3G05] (the protein of ''E. coli'', 51% identity) |
* '''UniProt:''' [http://www.uniprot.org/uniprot/P25812 P25812] | * '''UniProt:''' [http://www.uniprot.org/uniprot/P25812 P25812] | ||
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=References= | =References= | ||
| − | + | ==This protein in ''E. coli''== | |
| + | <pubmed> 19801413 </pubmed> | ||
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] | ||
Revision as of 08:52, 27 November 2009
- Description: glucose-inhibited division protein, tRNA uridine 5-carboxymethylaminomethyl modification enzyme
| Gene name | gidA |
| Synonyms | |
| Essential | no |
| Product | tRNA uridine 5-carboxymethylaminomethyl modification enzyme |
| Function | tRNA modification |
| MW, pI | 69 kDa, 6.326 |
| Gene length, protein length | 1884 bp, 628 aa |
| Immediate neighbours | rsmG, thdF |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
| |
Contents
The gene
Basic information
- Locus tag: BSU41010
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: mnmG family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization: cytoplasm (according to Swiss-Prot)
Database entries
- Structure: 3G05 (the protein of E. coli, 51% identity)
- UniProt: P25812
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
This protein in E. coli
Rong Shi, Magda Villarroya, Rafael Ruiz-Partida, Yunge Li, Ariane Proteau, Silvia Prado, Ismaïl Moukadiri, Alfonso Benítez-Páez, Rodrigo Lomas, John Wagner, Allan Matte, Adrián Velázquez-Campoy, M-Eugenia Armengod, Miroslaw Cygler
Structure-function analysis of Escherichia coli MnmG (GidA), a highly conserved tRNA-modifying enzyme.
J Bacteriol: 2009, 191(24);7614-9
[PubMed:19801413]
[WorldCat.org]
[DOI]
(I p)
