Difference between revisions of "YloH"
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| − | * '''Description:''' | + | * '''Description:''' omega subunit of [[RNA polymerase]] <br/><br/> |
{| align="right" border="1" cellpadding="2" | {| align="right" border="1" cellpadding="2" | ||
| Line 10: | Line 10: | ||
|style="background:#ABCDEF;" align="center"| '''Essential''' || no | |style="background:#ABCDEF;" align="center"| '''Essential''' || no | ||
|- | |- | ||
| − | |style="background:#ABCDEF;" align="center"| '''Product''' || | + | |style="background:#ABCDEF;" align="center"| '''Product''' || omega subunit of [[RNA polymerase]] |
|- | |- | ||
|style="background:#ABCDEF;" align="center"|'''Function''' || unknown | |style="background:#ABCDEF;" align="center"|'''Function''' || unknown | ||
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* '''Catalyzed reaction/ biological activity:''' Nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1) (according to Swiss-Prot) | * '''Catalyzed reaction/ biological activity:''' Nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1) (according to Swiss-Prot) | ||
| − | * '''Protein family:''' RNA polymerase subunit omega family (according to Swiss-Prot) | + | * '''Protein family:''' [[RNA polymerase]] subunit omega family (according to Swiss-Prot) |
* '''Paralogous protein(s):''' | * '''Paralogous protein(s):''' | ||
| Line 72: | Line 72: | ||
* '''Effectors of protein activity:''' | * '''Effectors of protein activity:''' | ||
| − | * '''Interactions:''' | + | * '''Interactions:''' closely associated to [[RNA polymerase]] ([[RpoA]](2)-[[RpoB]]-[[RpoC]]) {{PubMed|20724389}} |
| − | * '''Localization:''' | + | * '''Localization:'''closely associated with [[RNA polymerase]] involved in transcribing both mRNA and rRNA operons {{PubMed|20724389}} |
=== Database entries === | === Database entries === | ||
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* '''Additional information:''' | * '''Additional information:''' | ||
| + | ** present about at half the amount of core [[RNA polymerase]] {{PubMed|20724389}} | ||
=Biological materials = | =Biological materials = | ||
Revision as of 16:07, 21 August 2010
- Description: omega subunit of RNA polymerase
| Gene name | yloH |
| Synonyms | |
| Essential | no |
| Product | omega subunit of RNA polymerase |
| Function | unknown |
| Metabolic function and regulation of this protein in SubtiPathways: Nucleotides (regulation) | |
| MW, pI | 7 kDa, 5.513 |
| Gene length, protein length | 201 bp, 67 aa |
| Immediate neighbours | gmk, yloI |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
| |
Contents
The gene
Basic information
- Locus tag: BSU15690
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: Nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1) (according to Swiss-Prot)
- Protein family: RNA polymerase subunit omega family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions: closely associated to RNA polymerase (RpoA(2)-RpoB-RpoC) PubMed
- Localization:closely associated with RNA polymerase involved in transcribing both mRNA and rRNA operons PubMed
Database entries
- Structure:
- UniProt: O35011
- KEGG entry: [2]
- E.C. number: 2.7.7.6
Additional information
Expression and regulation
- Operon:
- Regulation:
- Regulatory mechanism:
- Additional information:
- present about at half the amount of core RNA polymerase PubMed
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
