ytpR

ytpR
168

similar to Phe-tRNA synthetase (beta subunit)

Locus
BSU_29820
Molecular weight
21.55 kDa
Isoelectric point
4.27
Protein length
201 aaSequenceBlast
Gene length
606 bpSequenceBlast
Function
unknown
Product
unknown
Essential
no
Synonyms
ytpR
Outlinks
BsubCyc SubtiList UniProt STRING Genoscapist PaperBLAST

Genomic Context

Categories containing this gene/protein

List of homologs in different organisms, belongs to COG0073 (Galperin et al., 2021)

This gene is a member of the following regulons

Gene
Coordinates
3,052,743 → 3,053,348
The protein
Domains
tRNA-binding domain (aa 90-200) (accordinig to UniProt)
Structure
3BU2 (PDB) (tRNA-binding protein from Staphylococcus saprophyticus, 59% identity)
O34943 (AlphaFold)
Expression and Regulation
Operons
Genes
ytpP-ytpQ-ytpR
Description
PubMed
Regulatory mechanism
Spx: activation, PubMed, in spx regulon
Sigma factors
SigA: sigma factor, PubMed, in sigA regulon
Open in new tab

ytpP→ytpR

2025-03-16 17:57:58

ghost

94

e3075f4343f005e46bbf1f8f6de68bdd8b77fdec

DE889C52EC07AB93CD9959D9559B3C7B78EAC111

Biological materials
Mutant
MGNA-A512 (ytpR::erm), available at the NBRP B. subtilis, Japan
BKE29820 (ΔytpR::erm  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_AGCGTTCATAAGTAAAAATC,  downstream forward: _UP4_TAGACTCCCATAAATCCGCC
BKK29820 (ΔytpR::kan  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_AGCGTTCATAAGTAAAAATC,  downstream forward: _UP4_TAGACTCCCATAAATCCGCC
References
Reviews
Loading
Original Publications
Loading

EE559CD606562097F09DC627F431CA31129D7BC6

Page visits: 2222

Time of last update: 2025-04-08 15:43:21

Author of last update: Jstuelk