yqxD

yqxD
168

unknown

Locus
BSU_25230
Molecular weight
22.40 kDa
Isoelectric point
7.17
Protein length
164 aaSequenceBlast
Gene length
495 bpSequenceBlast
Function
unknown
Product
unknown
Essential
no
E.C.
null
Synonyms
yqxD, yqfM
Outlinks
BsubCyc SubtiList UniProt STRING Genoscapist PaperBLAST

Genomic Context

Categories containing this gene/protein

List of homologs in different organisms, belongs to COG1671 (Galperin et al., 2021)

This gene is a member of the following regulons

Gene
Coordinates
2,603,373  2,603,867
The protein
Protein family
UPF0178 family (single member, according to UniProt)
Structure
P17868 (AlphaFold)
Expression and Regulation
Operons
Genes
yqxD-dnaG-sigA
Description
PubMed
Regulation
enzymatic activity is inhibited by (p)ppGpp during the 'stringent response
Regulatory mechanism
Spo0A: repression, PubMed, in spo0A regulon
Sigma factors
SigA: sigma factor, PubMed, in sigA regulon
SigH: sigma factor, PubMed, in sigH regulon
Additional information
An antisense RNA is predicted for sigA PubMed
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yqxD→sigA

2025-03-31 02:06:08

TPed

198

345BE3439F4414F1DA2FD49B273925B808601AB7

E9F2D1769ACB2AF65C67D8854D4F58BC49368B55

Biological materials
Mutant
MGNA-C491 (yqxD::erm), available at the NBRP B. subtilis, Japan
BKE25230 (yqxD::erm  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CATTAAACTCCTGCATAAAA,  downstream forward: _UP4_TAAAGCATCGAATAATGTAC
BKK25230 (yqxD::kan  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CATTAAACTCCTGCATAAAA,  downstream forward: _UP4_TAAAGCATCGAATAATGTAC
References
Reviews
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Original Publications
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398924959D6C82918617C4B050F72D5E78EE12E9

Page visits: 2577

Time of last update: 2025-04-22 21:11:21

Author of last update: Jstuelk