Difference between revisions of "RodZ"

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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ymfL]]'', ''[[pgsA]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ymfL]]'', ''[[pgsA]]''
 
|-
 
|-
|style="background:#FAF8CC;" align="center"|'''[http://subtiwiki.uni-goettingen.de/ymfM_nucleotide.txt    Gene sequence      (+200bp)  ]'''
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|colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+&#91;EMBLCDS:CAB13564&#93;+-newId sequences] <br/> (Barbe ''et al.'', 2009)'''
|style="background:#FAF8CC;" align="center"|'''[http://subtiwiki.uni-goettingen.de/ymfM_protein.txt Protein sequence]'''
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|-
 
|-
 
|-
|colspan="2" style="background:#FAF8CC;color:#FF0000" align="center" | '''Caution: The sequence for this gene in SubtiList contains errors
 
 
|-
 
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|colspan="2" | '''Genetic context''' <br/> [[Image:ymfM_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:ymfM_context.gif]]

Revision as of 23:43, 16 April 2009

  • Description: required for cell shape determination

Gene name rodZ
Synonyms ymfM
Essential no
Product
Function involved in morphogenesis
MW, pI 23 kDa, 4.679
Gene length, protein length 639 bp, 213 aa
Immediate neighbours ymfL, pgsA
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YmfM context.gif
This image was kindly provided by SubtiList





The gene

Basic information

  • Coordinates:

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure:
  • Swiss prot entry:
  • KEGG entry: [2]
  • E.C. number:

Additional information

overexpression results in growth inhibition in minimal medium (in the absence of Mg2+ )

Expression and regulation

  • Operon:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Adriano Henriques, Lisbon, Portugal homepage

Your additional remarks

References

  1. Alyahya et al. (2009) RodZ, a component of the bacterial core morphogenic apparatus. Proc. Natl. Acad. Sci. USA 106: 1239-1244. PubMed