Difference between revisions of "Sandbox"

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* '''Description:''' para-aminobenzoate synthase (subunit B)/ anthranilate synthase (subunit II) <br/><br/>
+
* '''Description:''' para-aminobenzoate synthase (subunit A) <br/><br/>
  
 
{| align="right" border="1" cellpadding="2"  
 
{| align="right" border="1" cellpadding="2"  
 
|-
 
|-
 
|style="background:#ABCDEF;" align="center"|'''Gene name'''
 
|style="background:#ABCDEF;" align="center"|'''Gene name'''
|''pabA''
+
|''pabB''
 
|-
 
|-
|style="background:#ABCDEF;" align="center"| '''Synonyms''' || ''trpG, trpX ''
+
|style="background:#ABCDEF;" align="center"| '''Synonyms''' || ''pab ''
 
|-
 
|-
 
|style="background:#ABCDEF;" align="center"| '''Essential''' || no  
 
|style="background:#ABCDEF;" align="center"| '''Essential''' || no  
 
|-
 
|-
|style="background:#ABCDEF;" align="center"| '''Product''' || para-aminobenzoate synthase (subunit B)/ <br/>anthranilate synthase (subunit II) <br/>glutamine amidotransferase (subunit B) <br/>and anthranilate synthase (subunit II)  
+
|style="background:#ABCDEF;" align="center"| '''Product''' || para-aminobenzoate synthase (subunit A)
 
|-
 
|-
|style="background:#ABCDEF;" align="center"|'''Function''' || biosynthesis of folate and tryptophan
+
|style="background:#ABCDEF;" align="center"|'''Function''' || biosynthesis of folate
 
|-
 
|-
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 21 kDa, 4.782  
+
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 53 kDa, 5.234  
 
|-
 
|-
|style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 582 bp, 194 aa  
+
|style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 1410 bp, 470 aa  
 
|-
 
|-
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[pabB]]'', ''[[pabC]]''
+
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[cysK]]'', ''[[pabA]]''
 
|-
 
|-
 
|colspan="2" style="background:#FAF8CC;" align="center"|'''Hier soll was neues rein'''
 
|colspan="2" style="background:#FAF8CC;" align="center"|'''Hier soll was neues rein'''
 
|-
 
|-
|colspan="2" | '''Genetic context''' <br/> [[Image:pabA_context.gif]]
+
|colspan="2" | '''Genetic context''' <br/> [[Image:pabB_context.gif]]
 
  <div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div>
 
  <div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div>
 
|-
 
|-
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__TOC__
 
__TOC__
  
<br/><br/><br/><br/><br/>
+
<br/><br/>
  
 
=The gene=
 
=The gene=
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* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/pabBAC-sul-folBK-yazB-yacF-lysS.html]
 
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/pabBAC-sul-folBK-yazB-yacF-lysS.html]
  
* '''SubtiList entry:''' [http://genolist.pasteur.fr/SubtiList/genome.cgi?gene_detail+BG10138]
+
* '''SubtiList entry:''' [http://genolist.pasteur.fr/SubtiList/genome.cgi?gene_detail+BG10137]
  
 
=== Additional information===
 
=== Additional information===
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* '''Swiss prot entry:'''
 
* '''Swiss prot entry:'''
  
* '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu+BSU00750]
+
* '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu+BSU00740]
  
* '''E.C. number:''' (EC 4.1.3.- and EC 4.1.3.27)
+
* '''E.C. number:'''
  
 
=== Additional information===
 
=== Additional information===

Revision as of 21:38, 15 April 2009

  • Description: para-aminobenzoate synthase (subunit A)

Gene name pabB
Synonyms pab
Essential no
Product para-aminobenzoate synthase (subunit A)
Function biosynthesis of folate
MW, pI 53 kDa, 5.234
Gene length, protein length 1410 bp, 470 aa
Immediate neighbours cysK, pabA
Hier soll was neues rein
Genetic context
PabB context.gif
This image was kindly provided by SubtiList



The gene

Basic information

  • Coordinates:

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure:
  • Swiss prot entry:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

  1. Author1, Author2 & Author3 (year) Title Journal volume: page-page. PubMed