Difference between revisions of "RodZ"

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|style="background:#FAF8CC;" align="center"|'''[http://subtiwiki.uni-goettingen.de/ymfM_nucleotide.txt    Gene sequence      (+200bp)  ]'''  
 
|style="background:#FAF8CC;" align="center"|'''[http://subtiwiki.uni-goettingen.de/ymfM_nucleotide.txt    Gene sequence      (+200bp)  ]'''  
 
|style="background:#FAF8CC;" align="center"|'''[http://subtiwiki.uni-goettingen.de/ymfM_protein.txt Protein sequence]'''
 
|style="background:#FAF8CC;" align="center"|'''[http://subtiwiki.uni-goettingen.de/ymfM_protein.txt Protein sequence]'''
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|-
 +
|colspan="2" style="background:#FAF8CC;color:#FF0000" align="center" | '''Caution: The sequence for this gene in SubtiList contains errors
 
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|colspan="2" | '''Genetic context''' <br/> [[Image:ymfM_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:ymfM_context.gif]]

Revision as of 14:23, 23 February 2009

  • Description: required for cell shape determination

Gene name rodZ
Synonyms ymfM
Essential no
Product
Function involved in morphogenesis
MW, pI 23 kDa, 4.679
Gene length, protein length 639 bp, 213 aa
Immediate neighbours ymfL, pgsA
Gene sequence (+200bp) Protein sequence
Caution: The sequence for this gene in SubtiList contains errors
Genetic context
YmfM context.gif



The gene

Basic information

  • Coordinates:

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure:
  • Swiss prot entry:
  • KEGG entry:
  • E.C. number:

Additional information

overexpression results in growth inhibition in minimal medium (in the absence of Mg2+ )

Expression and regulation

  • Operon:
  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Adriano Henriques, Lisbon, Portugal homepage

Your additional remarks

References

  1. Alyahya et al. (2009) RodZ, a component of the bacterial core morphogenic apparatus. Proc. Natl. Acad. Sci. USA 106: 1239-1244. PubMed