Difference between revisions of "Stusti 2018"
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== What makes RNA such a special molecule – specific chemical and structural features of RNA == | == What makes RNA such a special molecule – specific chemical and structural features of RNA == | ||
| − | <pubmed> 21930584 | + | <pubmed> 21930584</pubmed> |
| − | </pubmed> | ||
== RNA synthesis – DNA and RNA dependent RNA polymerases and primase during transcription, replication and repair == | == RNA synthesis – DNA and RNA dependent RNA polymerases and primase during transcription, replication and repair == | ||
| − | <pubmed> 24219496 | + | <pubmed> 24219496 8156586 28979293 26109351</pubmed> |
| − | </pubmed> | ||
| − | == Ribozymes (catalytically active RNAs)(Intro)== | + | == Ribozymes (catalytically active RNAs) (Intro)== |
| − | <pubmed> | + | <pubmed> 21930582</pubmed> |
| − | </pubmed> | ||
| − | == The Ribosome - the role and function of ribosomal RNAs | + | == The Ribosome - the role and function of ribosomal RNAs and the central dogma of molecular biology == |
| − | <pubmed> | + | <pubmed> 18292779 21930591 25500179</pubmed> |
| − | </pubmed> | ||
== The Splicosome - the mechanism of mRNA splicing – alternative gene expression, genome size definition and phenotype plasticity == | == The Splicosome - the mechanism of mRNA splicing – alternative gene expression, genome size definition and phenotype plasticity == | ||
| − | <pubmed> | + | <pubmed> 24452469,26682498 25798239 </pubmed> |
| − | </pubmed> | ||
== Protein independent ribozymes – about Hammerhead, Varkud satellite, hairpin ribozyme & Co == | == Protein independent ribozymes – about Hammerhead, Varkud satellite, hairpin ribozyme & Co == | ||
| − | <pubmed> | + | <pubmed> 22454536 14730013 10554775 21930585 6297745</pubmed> |
== RNA-based second messengers == | == RNA-based second messengers == | ||
| − | <pubmed>28420751 25616065 25682701 25869574 26280533</pubmed> | + | <pubmed> 28420751 25616065 25682701 25869574 26280533</pubmed> |
== Riboregulation and virulence, targeting by antibiotics == | == Riboregulation and virulence, targeting by antibiotics == | ||
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== Protein- or tRNA-controlled RNA switches == | == Protein- or tRNA-controlled RNA switches == | ||
| − | <pubmed>25959893 24816551 | + | <pubmed>25959893 24816551 25583497</pubmed> |
| − | |||
== RNA thermometers == | == RNA thermometers == | ||
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== RNA dependent DNA Polymerases - from telomerase to retroviruses== | == RNA dependent DNA Polymerases - from telomerase to retroviruses== | ||
| − | <pubmed> 18972389 26830230 28141967 | + | <pubmed> 18972389 26830230 28141967 </pubmed> |
| − | </pubmed> | ||
== RNA dependent RNA Polymerases – the RNA replicase == | == RNA dependent RNA Polymerases – the RNA replicase == | ||
| − | <pubmed> 29439438 18268843 9878607 | + | <pubmed> 29439438 18268843 9878607 </pubmed> |
| − | </pubmed> | ||
== CRISPR/Cas: Science – the bacterial “immune” system == | == CRISPR/Cas: Science – the bacterial “immune” system == | ||
| − | <pubmed> 29358495 29169146 | + | <pubmed> 29358495 29169146 28375731</pubmed> |
| − | |||
== CRISPR/Cas: Application and groundbreaking perspectives == | == CRISPR/Cas: Application and groundbreaking perspectives == | ||
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== The mysterious function and role of 6S-RNA and pRNA in bacteria == | == The mysterious function and role of 6S-RNA and pRNA in bacteria == | ||
| − | <pubmed> 24786589 | + | <pubmed> 24786589 17383220 24742053 23457253</pubmed> |
| − | </pubmed> | ||
== Synthesis, maturation and function of tRNAs – The wobble hypothesis and specific codon usage as a molecular barrier for horizontal gene transfer == | == Synthesis, maturation and function of tRNAs – The wobble hypothesis and specific codon usage as a molecular barrier for horizontal gene transfer == | ||
| − | <pubmed> | + | <pubmed> 22016848 26186290 21957054 23166520 21930591</pubmed> |
| − | </pubmed> | ||
== Outlook: Finding function in mystery transcripts – eRNAs, long-non coding (lncRNA) and circular RNA (circRNA) == | == Outlook: Finding function in mystery transcripts – eRNAs, long-non coding (lncRNA) and circular RNA (circRNA) == | ||
| − | <pubmed> | + | <pubmed> 28533025 25561718 26883671 28485684 29182528 21925379</pubmed> |
| − | |||
| − | </pubmed> | ||
== Outlook: RNA and SELEX – new prospects and applications for targeted interference with regulatory pathways == | == Outlook: RNA and SELEX – new prospects and applications for targeted interference with regulatory pathways == | ||
| − | <pubmed> | + | <pubmed> 17627883 19943183 </pubmed> |
| − | </pubmed> | ||
Revision as of 13:37, 22 June 2018
Contents
- 1 Die Sprache der RNA: Von RNA-Schaltern zu CRISPR/ Cas
- 1.1 What makes RNA such a special molecule – specific chemical and structural features of RNA
- 1.2 RNA synthesis – DNA and RNA dependent RNA polymerases and primase during transcription, replication and repair
- 1.3 Ribozymes (catalytically active RNAs) (Intro)
- 1.4 The Ribosome - the role and function of ribosomal RNAs and the central dogma of molecular biology
- 1.5 The Splicosome - the mechanism of mRNA splicing – alternative gene expression, genome size definition and phenotype plasticity
- 1.6 Protein independent ribozymes – about Hammerhead, Varkud satellite, hairpin ribozyme & Co
- 1.7 RNA-based second messengers
- 1.8 Riboregulation and virulence, targeting by antibiotics
- 1.9 Riboswitches
- 1.10 Protein- or tRNA-controlled RNA switches
- 1.11 RNA thermometers
- 1.12 The RNA world and evolution
- 1.13 RNA modification
- 1.14 RNA degradation/processing
- 1.15 Regulation by non-coding RNA
- 1.16 RNA dependent DNA Polymerases - from telomerase to retroviruses
- 1.17 RNA dependent RNA Polymerases – the RNA replicase
- 1.18 CRISPR/Cas: Science – the bacterial “immune” system
- 1.19 CRISPR/Cas: Application and groundbreaking perspectives
- 1.20 The mysterious function and role of 6S-RNA and pRNA in bacteria
- 1.21 Synthesis, maturation and function of tRNAs – The wobble hypothesis and specific codon usage as a molecular barrier for horizontal gene transfer
- 1.22 Outlook: Finding function in mystery transcripts – eRNAs, long-non coding (lncRNA) and circular RNA (circRNA)
- 1.23 Outlook: RNA and SELEX – new prospects and applications for targeted interference with regulatory pathways
Die Sprache der RNA: Von RNA-Schaltern zu CRISPR/ Cas
What makes RNA such a special molecule – specific chemical and structural features of RNA
RNA synthesis – DNA and RNA dependent RNA polymerases and primase during transcription, replication and repair
Ribozymes (catalytically active RNAs) (Intro)
David M J Lilley
Mechanisms of RNA catalysis.
Philos Trans R Soc Lond B Biol Sci: 2011, 366(1580);2910-7
[PubMed:21930582]
[WorldCat.org]
[DOI]
(I p)
The Ribosome - the role and function of ribosomal RNAs and the central dogma of molecular biology
The Splicosome - the mechanism of mRNA splicing – alternative gene expression, genome size definition and phenotype plasticity
Protein independent ribozymes – about Hammerhead, Varkud satellite, hairpin ribozyme & Co
RNA-based second messengers
Riboregulation and virulence, targeting by antibiotics
Riboswitches
Protein- or tRNA-controlled RNA switches
RNA thermometers
The RNA world and evolution
RNA modification
RNA degradation/processing
John C Zinder, Christopher D Lima
Targeting RNA for processing or destruction by the eukaryotic RNA exosome and its cofactors.
Genes Dev: 2017, 31(2);88-100
[PubMed:28202538]
[WorldCat.org]
[DOI]
(I p)
Soraya Aït-Bara, Agamemnon J Carpousis
RNA degradosomes in bacteria and chloroplasts: classification, distribution and evolution of RNase E homologs.
Mol Microbiol: 2015, 97(6);1021-135
[PubMed:26096689]
[WorldCat.org]
[DOI]
(I p)
Jonathan Houseley, David Tollervey
The many pathways of RNA degradation.
Cell: 2009, 136(4);763-76
[PubMed:19239894]
[WorldCat.org]
[DOI]
(I p)
Regulation by non-coding RNA
RNA dependent DNA Polymerases - from telomerase to retroviruses
RNA dependent RNA Polymerases – the RNA replicase
CRISPR/Cas: Science – the bacterial “immune” system
CRISPR/Cas: Application and groundbreaking perspectives
The mysterious function and role of 6S-RNA and pRNA in bacteria
Synthesis, maturation and function of tRNAs – The wobble hypothesis and specific codon usage as a molecular barrier for horizontal gene transfer
Outlook: Finding function in mystery transcripts – eRNAs, long-non coding (lncRNA) and circular RNA (circRNA)
Outlook: RNA and SELEX – new prospects and applications for targeted interference with regulatory pathways
