Difference between revisions of "SinR regulon"
(Created page with " {{RegulonTable| Regulator=SinR }} = Genes in this regulon = === Repression === * ''aprE'' * ''epr'' * ''epsA'' * ''epsB'' * ''epsC'' * ''epsD'' * '...") |
(→Repression) |
||
| (15 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
| − | |||
{{RegulonTable| | {{RegulonTable| | ||
Regulator=[[SinR]] | Regulator=[[SinR]] | ||
}} | }} | ||
| + | |||
| + | * SinR may act as transcriptional repressor at some promoters (as for the ''[[tapA]]'' promoter) and as anti-activator preventing binding of [[RemA]] for other operons (as is the case for the ''[[epsA]]'' promoter) {{PubMed|23646920}} | ||
= Genes in this regulon = | = Genes in this regulon = | ||
| Line 8: | Line 9: | ||
=== Repression === | === Repression === | ||
* ''[[aprE]]'' | * ''[[aprE]]'' | ||
| + | * ''[[degU]]'' | ||
* ''[[epr]]'' | * ''[[epr]]'' | ||
| − | * ''[[ | + | * ''[[lutA]]-[[lutB]]-[[lutC]]'' |
| − | + | * ''[[mstX]]'' | |
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | * ''[[ | ||
| − | |||
| − | |||
| − | |||
| − | |||
* ''[[rapG]]'' | * ''[[rapG]]'' | ||
* ''[[rok]]'' | * ''[[rok]]'' | ||
| Line 32: | Line 18: | ||
* ''[[sigF]]'' | * ''[[sigF]]'' | ||
* ''[[sigG]]'' | * ''[[sigG]]'' | ||
| − | |||
* ''[[slrR]]'' | * ''[[slrR]]'' | ||
| − | * ''[[spoIIAA]] | + | * ''[[spoIIAA]]-[[spoIIAB]]'' |
| − | |||
* ''[[spoIIGA]]'' | * ''[[spoIIGA]]'' | ||
* ''[[spoVG]]'' | * ''[[spoVG]]'' | ||
| − | * ''[[tasA]]'' | + | * ''[[tapA]]-[[sipW]]-[[tasA]]'' |
| − | * ''[[ | + | * ''[[yugO]]'' |
* ''[[yvgN]]'' | * ''[[yvgN]]'' | ||
* ''[[ywbD]]'' | * ''[[ywbD]]'' | ||
| + | |||
| + | === Anti-activation (Prevention of binding of the activator protein [[RemA]]) === | ||
| + | * ''[[epsA]]-[[epsB]]-[[epsC]]-[[epsD]]-[[epsE]]-[[epsF]]-[[epsG]]-[[epsH]]-[[epsI]]-[[epsJ]]-[[epsK]]-[[epsL]]-[[epsM]]-[[epsN]]-[[epsO]]'' | ||
| + | |||
| + | = Comments = | ||
| + | * The [[SinR]] regulon is not expressed in ''[[rny]]'' and ''[[ymdB]]'' mutants {{PubMed|21856853,21815947}} | ||
| + | * Expression of the [[SinR regulon]] is enhanced upon [[SlrA]] overexpression, this can be suppressed by inactivation of either ''[[remA]]'', ''[[remB]]'', ''[[slrR]]'', or ''[[sinR]]'' {{PubMed|22329926}} | ||
| + | * Expression of the [[SinR regulon]] is enhanced in a ''[[rpsU]]'' mutant, this can be suppressed by inactivation of ''[[remA]]'' {{PubMed|25035996}} | ||
| + | |||
| + | = Related ''Subti''Wiki pages= | ||
| + | * [[biofilm formation]] | ||
| + | * [[RemA regulon]] | ||
| + | |||
| + | = Important publications on the [[SinR]] regulon = | ||
| + | <pubmed>18763711,19193632,17005971 19779461 19820159 20418391 20525796 20572937,21803996 21843271 22329926 21856853 21815947 25035996 16430695</pubmed> | ||
| + | |||
| + | =Back to [[regulons]]= | ||
Latest revision as of 14:29, 30 November 2014
| Regulator | |
- SinR may act as transcriptional repressor at some promoters (as for the tapA promoter) and as anti-activator preventing binding of RemA for other operons (as is the case for the epsA promoter) PubMed
Contents
Genes in this regulon
Repression
- aprE
- degU
- epr
- lutA-lutB-lutC
- mstX
- rapG
- rok
- sigE
- sigF
- sigG
- slrR
- spoIIAA-spoIIAB
- spoIIGA
- spoVG
- tapA-sipW-tasA
- yugO
- yvgN
- ywbD
Anti-activation (Prevention of binding of the activator protein RemA)
Comments
- The SinR regulon is not expressed in rny and ymdB mutants PubMed
- Expression of the SinR regulon is enhanced upon SlrA overexpression, this can be suppressed by inactivation of either remA, remB, slrR, or sinR PubMed
- Expression of the SinR regulon is enhanced in a rpsU mutant, this can be suppressed by inactivation of remA PubMed
Related SubtiWiki pages
Important publications on the SinR regulon
