Difference between revisions of "SprA"
| Line 14: | Line 14: | ||
|style="background:#ABCDEF;" align="center"|'''Function''' || excision of prophage SPβ | |style="background:#ABCDEF;" align="center"|'''Function''' || excision of prophage SPβ | ||
|- | |- | ||
| − | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU21660 | + | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU21660 sprA] |
|- | |- | ||
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 62 kDa, 8.946 | |style="background:#ABCDEF;" align="center"| '''MW, pI''' || 62 kDa, 8.946 | ||
| Line 104: | Line 104: | ||
* '''Operon:''' | * '''Operon:''' | ||
| − | * '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yokA_2284771_2286408_1 | + | * '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yokA_2284771_2286408_1 sprA] {{PubMed|22383849}} |
* '''[[Sigma factor]]:''' | * '''[[Sigma factor]]:''' | ||
Revision as of 08:16, 10 October 2014
- Description: DNA recombinase, SPβ site-specific recombination factor A
| Gene name | yokA |
| Synonyms | |
| Essential | no |
| Product | SPβ site-specific recombination factor A |
| Function | excision of prophage SPβ |
| Gene expression levels in SubtiExpress: sprA | |
| MW, pI | 62 kDa, 8.946 |
| Gene length, protein length | 1635 bp, 545 aa |
| Immediate neighbours | yokB, ypqP |
| Sequences | Protein DNA DNA_with_flanks |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
DNA repair/ recombination, SP-beta prophage
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU21660
Phenotypes of a mutant
Database entries
- BsubCyc: BSU21660
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- BsubCyc: BSU21660
- Structure:
- UniProt: O32006
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Operon:
- Regulation:
- Regulatory mechanism:
- Additional information:
- number of protein molecules per cell (minimal medium with glucose and ammonium): 154 PubMed
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
