yesX
168

rhamnogalacturonanlyase, degrades oligo- to disaccharides

Locus

BSU_07060

Molecular weight

67.51 kDa

Isoelectric point

5.22

Protein length

612 aaSequenceBlast

Gene length

1839 bpSequenceBlast

Function

utilization of rhamnogalacturonan

Product

rhamnogalacturonan lyase, degrades oligo- to disaccharides

Essential

E.C.

null

Synonyms

yesX

Outlinks

BsubCyc SubtiList UniProt STRING Genoscapist PaperBLAST

Genomic Context

Hide small RNAsZoom:

Categories containing this gene/protein

List of homologs in different organisms

This gene is a member of the following regulons

Gene

Coordinates

772,142 773,980

The protein

Catalyzed reaction/ biological activity

Exotype eliminative cleavage of alpha-L-rhamnopyranosyl-(1->4)-alpha-D-galactopyranosyluronic acid bonds of rhamnogalacturonan I oligosaccharides containing alpha-L-rhamnopyranose at the reducing end and 4-deoxy-4,5-unsaturated D-galactopyranosyluronic acid at the non-reducing end. The products are the disaccharide 2-O-(4-deoxy-beta-L-threo-hex-4-enopyranuronosyl)-alpha-L-rhamnopyranose and the shortened rhamnogalacturonan oligosaccharide containing one 4-deoxy-4,5-unsaturated D-galactopyranosyluronic acid at the non-reducing end (according to UniProt)

Protein family

polysaccharide lyase 11 family (with YesW, according to UniProt)

Structure

2ZUY (PDB)

O31527 (AlphaFold)

Paralogous protein(s)

YesW

Localization

secreted (according to Swiss-Prot)

Expression and Regulation

Operons

Genes