ydfI

ydfI
168

two-component response regulator, control of ydfJ expression

Locus
BSU_05420
Molecular weight
23.83 kDa
Isoelectric point
5.38
Protein length
213 aaSequenceBlast
Gene length
642 bpSequenceBlast
Function
control of ydfJ expression
Product
two-component response regulator
Essential
no
Synonyms
ydfI
Outlinks
BsubCyc SubtiList UniProt STRING Genoscapist PaperBLAST

Genomic Context

Categories containing this gene/protein

List of homologs in different organisms, belongs to COG2197 (Galperin et al., 2021)

This gene is a member of the following regulons

Gene
Coordinates
588,960 → 589,601
The protein
Domains
Response regulatory domain (aa 3-118) (according to UniProt)
HTH luxR-type domain (aa 142-207) (according to UniProt)
Structure
5HEV (PDB) (LiaR from Enterococcus faecium, 37% identity) PubMed
P96686 (AlphaFold)
Modification
phosphorylation by YdfH on an Asp residue
Paralogous protein(s)
YxjL, LnrK, LiaR, YhcZ
Localization
cytoplasma (according to Swiss-Prot)
Expression and Regulation
Operons
Genes
ydfH-ydfI
Description
PubMed
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ydfH→ydfI

2025-04-10 11:27:02

ghost

106

f26084e95d34ac9ca538739cbbe65845a203d81d

4EECCA8F59C822E9AD4F1E1A51CBD5C226501351

Biological materials
Mutant
MGNA-C148 (ydfI::erm), available at the NBRP B. subtilis, Japan
BKE05420 (ΔydfI::erm  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_AAGATGGTCATCAACGATTA,  downstream forward: _UP4_TAAACTGCATATTTGAAAAT
BKK05420 (ΔydfI::kan  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_AAGATGGTCATCAACGATTA,  downstream forward: _UP4_TAAACTGCATATTTGAAAAT
References
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EFEAF09E4449A022A7323450FDED9458426A0080

Page visits: 2892

Time of last update: 2025-04-11 13:01:57

Author of last update: Christoph.elfmann