yckB

yckB
168

similar to amino acid ABC transporter (binding protein)

Locus
BSU_03380
Molecular weight
31.57 kDa
Isoelectric point
8.49
Protein length
287 aaSequenceBlast
Gene length
864 bpSequenceBlast
Function
unknown
Product
unknown
Essential
no
Synonyms
yckB
Outlinks
BsubCyc SubtiList UniProt STRING Genoscapist PaperBLAST

Genomic Context

Categories containing this gene/protein

List of homologs in different organisms, belongs to COG0834 (Galperin et al., 2021)

This gene is a member of the following regulons

Gene
Coordinates
367,995  368,858
The protein
Protein family
bacterial solute-binding protein 3 family (according to UniProt)
Structure
2IEE (PDB)
P42400 (AlphaFold)
Paralogous protein(s)
TcyA
Localization
associated to the membrane (via YckA) PubMed
Expression and Regulation
Operons
Genes
yckB-yckA
Description
PubMed
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yckB→yckA

2025-03-16 18:30:31

Jstuelk

119

cd5a57519adc46d46da39741069f94c69b925750

C74A617AE5313DE93EED08FE6C32E099016B6B6E

Biological materials
Mutant
MGNA-C053 (yckB::erm), available at the NBRP B. subtilis, Japan
CS208 (''yckB::aphA3'', available in Colin Harwood's and Jörg Stülke's labs) PubMed
BKE03380 (yckB::erm  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CACCTATAGTTCCCCCAATC,  downstream forward: _UP4_GACGTTGATTTGTAATCGGA
BKK03380 (yckB::kan  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CACCTATAGTTCCCCCAATC,  downstream forward: _UP4_GACGTTGATTTGTAATCGGA
References
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7050A2CC4BA2183C3CD22A246846CBCE43D73ABC

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Time of last update: 2025-04-09 22:44:42

Author of last update: Jstuelk